Gene Caul_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1650 
Symbol 
ID5899105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1730487 
End bp1731869 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content69% 
IMG OID641562139 
ProductTPR repeat-containing protein 
Protein accessionYP_001683277 
Protein GI167645614 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.154424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACAAGC TTGTCGTTAT CGCCGCGCTG CTGGCGGCTG CCGCGCCCGT GGCGCGCGCC 
CAGGCGCCAT CCCCGCCGAC ACTAACAAGG TCGGAGCCGC CCCCCGTGGC CGCGCCCCGC
GACGCCGGTG GTTGGCTCGC CCGGTCCTAT GTCGAGCAGG AGCGGGGCGA CAACCGCGCC
GCCAGGGCCA GCCTGGACGA AGCGTTGAAG CTGCAGCCCG ATTTCCCCCT GGCGCGGCTG
ACGCGGGCCA TGGTGCTGTC GGATCTCAAG GAGACCGATG CGGCCATCGC CGACATCGAC
GCCCTGGGGG CCTTCACGCC GCCGGATCAG ATCTTGCGGA TGAAGATCGA CATCTTCCGG
ACCGGCGGCC GTTATCGTGA AGCCATCGAT GCGGGCAAGG CCCTGGTGGC GCTGAAGCCG
GACAGCGCCG ACGCCTATCG TCGTCTTGGC CACGCCCGCC AAGCCTCGGA AAACGAAGCC
GAGGGCAAGG CCGCCTTGGC CGACTACGAC AAGGCGCTGA AGCTGGATCC CGACATGTTG
AAGGTCTACG CCCTGCGCGG CGAGATCCTC AGCGCCCGGC GCGACGTCAA GGGCGTGGAG
CGCAACTACC AGGCCTGGCT GGCCAAGGCG CCCGACAGCG CCGACGCCCA TGCGGCCTAT
GCCGACGCCC TGCGCCGGGT TGGGAAACCC GACAAGGCCA AGGTCGAGAT CGATCGGGCG
CTGGAACTGA AACCCTCGGC TCAGGCCTAT CTGGCGCGGG CTGAAATGAC GCCCGACGAC
CAGCGCGACG CCGCGCTGGC CGACATCGAC AAGGCCCTGG CGCTGGAGCC CAAATCCAGC
TTCACCTATG TGGCGCGCGC CCGGATGCGA GGACGGTGGA AGCAACCGGA CCTGGCGATG
GCCGACGCCG AGAAGGCGTT GGAGCTCTGG CCCGAGAACT TCGCCGCCCG CCTGATCCGC
TACCAGTTGA ATCAGGACTC CGGTCACTAT GACCTGGCGA TCAAGGATCT CGACAACCTG
ATCGCTCGTC GGCCCGACGA GGCGATGCTG CTCAACAACC GCTGCTGGAC GCGGGCTCTG
GCCAACCGGG AGCTGGATCT GGCCCTGGCC GATTGCGAGG TCTCGCTGAA GATCGCCAGG
AATCCCGCGA CCCTGGACAG CCGGGCCTTC GTCAAGCTGC GCAAGGGCGA TCTGGCGGGT
TCGATCGCCG ACTATGACGC GGCCCTGAAG CTGGCGCCCG ACCAGGCCGC TTCGCTGTTC
GGGCGCGGCT TGGCCAAGCG GCGGAGCGGG GCGACGGCGG CCGGCGACGC CGACCTGGCC
GCAGCTCGCA AGATCGCCCC GGAGATCGAC AAGCGCTTCG CCGGTTACGG GGTGACGCCT
TAG
 
Protein sequence
MHKLVVIAAL LAAAAPVARA QAPSPPTLTR SEPPPVAAPR DAGGWLARSY VEQERGDNRA 
ARASLDEALK LQPDFPLARL TRAMVLSDLK ETDAAIADID ALGAFTPPDQ ILRMKIDIFR
TGGRYREAID AGKALVALKP DSADAYRRLG HARQASENEA EGKAALADYD KALKLDPDML
KVYALRGEIL SARRDVKGVE RNYQAWLAKA PDSADAHAAY ADALRRVGKP DKAKVEIDRA
LELKPSAQAY LARAEMTPDD QRDAALADID KALALEPKSS FTYVARARMR GRWKQPDLAM
ADAEKALELW PENFAARLIR YQLNQDSGHY DLAIKDLDNL IARRPDEAML LNNRCWTRAL
ANRELDLALA DCEVSLKIAR NPATLDSRAF VKLRKGDLAG SIADYDAALK LAPDQAASLF
GRGLAKRRSG ATAAGDADLA AARKIAPEID KRFAGYGVTP