Gene Caul_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1642 
Symbol 
ID5899097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1723304 
End bp1724209 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content72% 
IMG OID641562131 
ProductABC transporter related 
Protein accessionYP_001683269 
Protein GI167645606 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0749423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGG CCCTTGAGGC CCAGAGCCTC GTCAAGACCT ATGGCGCGGT GCGCGCCCTG 
GACGACCTGT CGCTAAGCAT ACCGGCCGGC GGCGTGTTCG GCGTCCTGGG TCCCAACGGC
GCGGGCAAGA GCACCCTATT CCGCATCGCC CTGGGCCTGG TGCGGCCGAC CAGCGGGTCG
GCGCGGCTGT TCGGCGCTCC GGCTGGCCAG ACCTCGGCCC TGCGCCGCGT CGGGGCGATG
ATCGAGACCC CGCGCTATCC GCCCTATCTG ACCGCCCGCG ACACCCTGAA GATGCTGGCC
CTCGAAAGCG GGGCCAGCGG CAGCGCCGAC ATCGACTACT GGCTGGAACG CGTCGGCCTG
GGCGGCGCCG CCGATCGCCG GTCCGGGACC TTCTCGGTCG GCATGAAACA GCGCCTGGGC
CTGGCGGCGG CGTTTTTCAC CCGCCCCGAA CTGGTGATCC TCGACGAGCC GACCAGCGGC
ATGGACCCGG CCGGCATCCA GGAGATCCGC GCCCTGATCC GCGACCTGGC CGACAAGGAG
GGCGTGACCA TCATCCTGGC CAGCCACCAA CTGGACGAGG TGCGCCGCGT CTGCGACCGG
GTGGCGATCT TCTCCAAGGG CAAGCTGGCG GCGGAGGGCT CGGTCGAGGC CCTGACCGGC
GGCCGCGCCC GCCTGCGCCT GACCGTGACC CCGATCGACA AGGCCCTGGC CGTGCTGGGC
GACCGCGGCG AACCGGACGG TCCCGAAACC GTGCTGGCCG ACGTTTCCCG CGCCGAGACG
CCGGCCCTGA TCCGGGCCCT GGTCGAGGCC GGTGTCGAGA TCAGCGAGGC CCGCTGGCGC
GAGGCCGACC TGGAGAGCGC CTATCTGGGC GCCCTGGAAG AGAAGGACGC GGCCAATGCT
CGCTGA
 
Protein sequence
MTLALEAQSL VKTYGAVRAL DDLSLSIPAG GVFGVLGPNG AGKSTLFRIA LGLVRPTSGS 
ARLFGAPAGQ TSALRRVGAM IETPRYPPYL TARDTLKMLA LESGASGSAD IDYWLERVGL
GGAADRRSGT FSVGMKQRLG LAAAFFTRPE LVILDEPTSG MDPAGIQEIR ALIRDLADKE
GVTIILASHQ LDEVRRVCDR VAIFSKGKLA AEGSVEALTG GRARLRLTVT PIDKALAVLG
DRGEPDGPET VLADVSRAET PALIRALVEA GVEISEARWR EADLESAYLG ALEEKDAANA
R