| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1638 |
|---|
| Symbol | |
|---|
| ID | 5899093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 1718899 |
|---|
| End bp | 1719915 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641562127 |
|---|
| Product | DNA-directed RNA polymerase subunit alpha |
|---|
| Protein accession | YP_001683265 |
|---|
| Protein GI | 167645602 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
|---|
| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.145818 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0211449 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGAAA GAAACTGGAA CGAGCTGATC CGTCCTGAGA AGCCGCAGAT CGAGACTGGC
GCCGACGCGA CCCGCAAGGC TCGCATCGTG GCCGAGCCGC TCGAACGCGG TTTCGGTGTG
ACGCTCGGCA ACGCTCTCCG CCGTGTCCTG CTCTCGTCGC TTCAGGGCGC CGCCGTCACC
GCCATCCAGA TCGATGGCGT GGTGCACGAA TTCTCCTCGC TCGAGGGCGT CCGCGAAGAC
GTCGTCGACA TCGTTCTGAA CATCAAGCAA CTGGCCGTGC GCATGCACGC CGAAGGCCCC
AAGCGCATGA CCCTGCGCGC CACGGGTCCC GGCGTCGTGA CCGCGGGTCA GATCGAAACG
CCTTCGGACA TCGAGATCCT GAACCCCGAC CACGTGCTCT GCACGCTGGA CGACGGCGCT
TCGGTGCGCA TGGAGTTCAC GGTCAACACC GGCAAGGGCT ACGTCCCTGC CGACAAGAAC
CGTCCGGAAG ACGCGCCGAT CGGCCTGATC GCCGTCGACG CCCTCTACAG CCCGGTCAAG
CGCGTGGCTT ACCGCGTCGA GCCGACCCGT CAGGGTCAAT CGCTCGACTA TGACAAGCTG
ATCCTGGAAG TCGAAACCAA CGGCGCCGTC ACGCCGGTGG ACGCGGTGGC CTACGCCGCC
CGCATCCTGC AAGACCAGCT GCAGATCTTC ATCACCTTCG AAGAGCCCAA GGCCAAGACG
GCCGACGAGG CCAAGCCGGA ACTGCCGTTC AACCCGGCGC TCCTGAAGAA GGTCGATGAG
CTGGAACTGT CGGTCCGTTC GGCCAACTGC CTGAAGAACG ACAACATCGT CTATATCGGC
GACCTGATCC AGAAGACCGA AGCCGAGATG CTCCGCACCC CGAACTTCGG CCGCAAGTCC
TTGAACGAAA TCAAGGAAGT GCTGGCCGGC ATGGGTCTGC ACCTGGGCAT GGACGTTCCG
AACTGGCCGC CGGAAAACAT CGAAGACCTG GCCAAGAAGT TCGAAGACCA GATCTAA
|
|---|
| Protein sequence | MIERNWNELI RPEKPQIETG ADATRKARIV AEPLERGFGV TLGNALRRVL LSSLQGAAVT
AIQIDGVVHE FSSLEGVRED VVDIVLNIKQ LAVRMHAEGP KRMTLRATGP GVVTAGQIET
PSDIEILNPD HVLCTLDDGA SVRMEFTVNT GKGYVPADKN RPEDAPIGLI AVDALYSPVK
RVAYRVEPTR QGQSLDYDKL ILEVETNGAV TPVDAVAYAA RILQDQLQIF ITFEEPKAKT
ADEAKPELPF NPALLKKVDE LELSVRSANC LKNDNIVYIG DLIQKTEAEM LRTPNFGRKS
LNEIKEVLAG MGLHLGMDVP NWPPENIEDL AKKFEDQI
|
|---|
| |