Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1626 |
Symbol | rplE |
ID | 5899081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 1711921 |
End bp | 1712478 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641562115 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_001683253 |
Protein GI | 167645590 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.317826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.302656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGATC AAGCTTACGA GCCGCGGCTG AAGTCCGAAT ATCGCGCGCG CATCCGCGCC GCGATGAAGG AACAGTTCGC GTACACCAAC GAGATGCAGA TCCCCAAGCT GGACAAGATC GTCCTGAACA TGGGCATCGG CGAAGCTGTG GCCGACTCCA AGAAGGCCCA GACCGCGCTG AAGGATCTGA TGGCCATCGC CGGCCAGAAG CCGGTCGCCA CGAAGGCCCG CAAGTCCATC GCCGGCTTCA AGCTGCGCGA AGGCATGGTG GTCGGCGCCA AGGTGACCCT CCGCAAGGAC AAAATGTACG AGTTTCTGGA CCGCCTGGTC ACGATCGCGC TGCCGCGCGT GAAGGACTTC CGCGGCCTGA ACGGCAAGAG CTTCGACGGT CGTGGCAACT ACGCCATGGG CCTGAAGGAG CACCTGGTGT TCCCGGAAAT CAACTATGAC CAGATCGAAC AGATCTGGGG CATGGACATC ATCGTCTGCA CCACTGCGAA GACCGATCAG GAAGCCAAGG CGCTCCTGAA GGAATTCCAG TTCCCGTTCA CGAATTAA
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Protein sequence | MVDQAYEPRL KSEYRARIRA AMKEQFAYTN EMQIPKLDKI VLNMGIGEAV ADSKKAQTAL KDLMAIAGQK PVATKARKSI AGFKLREGMV VGAKVTLRKD KMYEFLDRLV TIALPRVKDF RGLNGKSFDG RGNYAMGLKE HLVFPEINYD QIEQIWGMDI IVCTTAKTDQ EAKALLKEFQ FPFTN
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