Gene Caul_1615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1615 
SymbolrplD 
ID5899070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1707141 
End bp1707779 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content64% 
IMG OID641562104 
Product50S ribosomal protein L4 
Protein accessionYP_001683242 
Protein GI167645579 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.140901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG ACGTCATCAA TCTGGACGGC GGCAAGGCCG GCTCCGTTGA TCTCGACGAC 
GCCATCTTTG GCATCGCCGA CATCCGCGGG GACATCCTGC AGCGCGTCGT CACCTGGCAG
CTGGCCAAGC GCCGCTCCGG GAACCACAAG ATTCAGGTCC GCAACGAGGT CTCTCGCACG
GGCAAGAAGA TGTACAAGCA AAAGGGCACC GGCTCGGCTC GTCACGGTTC GCGCCGTGCG
GCTCAGTTCG TCGGCGGCGC CAAGGCTCAC GGCCCTGTCG TCCGCAGCCA CGCGTTCGAT
CTTCCCAAGA AGATCCGCGC CATGGCCCTG CGCCACGCCC TGTCCTCGAA GGCCAAGTCC
GGTTCGATCA TCGTGCTGGA CACCGCCGTT CTGACCGACC CGAAGACGGC CGCCCTGCGC
GCCAACTTCG ACAAGATCGG TCTGAAGAAC GCCCTGGTCA TCGCGGGTCC GGAAGTGGAC
GGCAACTTCA AGCTCGCCGC CCGCAACATT CCGAACATCG ACGTGCTGCC GAACGCCGGC
CTGAACGTCT ATGACGTGCT GCGTCGCCAC ACCCTGGTCC TCACCAAGGA CGCGGTGGAA
GCGATCTCGG CTCGTTTCGC TGAGAAGGAA GCCGCCTGA
 
Protein sequence
MKLDVINLDG GKAGSVDLDD AIFGIADIRG DILQRVVTWQ LAKRRSGNHK IQVRNEVSRT 
GKKMYKQKGT GSARHGSRRA AQFVGGAKAH GPVVRSHAFD LPKKIRAMAL RHALSSKAKS
GSIIVLDTAV LTDPKTAALR ANFDKIGLKN ALVIAGPEVD GNFKLAARNI PNIDVLPNAG
LNVYDVLRRH TLVLTKDAVE AISARFAEKE AA