Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1615 |
Symbol | rplD |
ID | 5899070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 1707141 |
End bp | 1707779 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641562104 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_001683242 |
Protein GI | 167645579 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.140901 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCG ACGTCATCAA TCTGGACGGC GGCAAGGCCG GCTCCGTTGA TCTCGACGAC GCCATCTTTG GCATCGCCGA CATCCGCGGG GACATCCTGC AGCGCGTCGT CACCTGGCAG CTGGCCAAGC GCCGCTCCGG GAACCACAAG ATTCAGGTCC GCAACGAGGT CTCTCGCACG GGCAAGAAGA TGTACAAGCA AAAGGGCACC GGCTCGGCTC GTCACGGTTC GCGCCGTGCG GCTCAGTTCG TCGGCGGCGC CAAGGCTCAC GGCCCTGTCG TCCGCAGCCA CGCGTTCGAT CTTCCCAAGA AGATCCGCGC CATGGCCCTG CGCCACGCCC TGTCCTCGAA GGCCAAGTCC GGTTCGATCA TCGTGCTGGA CACCGCCGTT CTGACCGACC CGAAGACGGC CGCCCTGCGC GCCAACTTCG ACAAGATCGG TCTGAAGAAC GCCCTGGTCA TCGCGGGTCC GGAAGTGGAC GGCAACTTCA AGCTCGCCGC CCGCAACATT CCGAACATCG ACGTGCTGCC GAACGCCGGC CTGAACGTCT ATGACGTGCT GCGTCGCCAC ACCCTGGTCC TCACCAAGGA CGCGGTGGAA GCGATCTCGG CTCGTTTCGC TGAGAAGGAA GCCGCCTGA
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Protein sequence | MKLDVINLDG GKAGSVDLDD AIFGIADIRG DILQRVVTWQ LAKRRSGNHK IQVRNEVSRT GKKMYKQKGT GSARHGSRRA AQFVGGAKAH GPVVRSHAFD LPKKIRAMAL RHALSSKAKS GSIIVLDTAV LTDPKTAALR ANFDKIGLKN ALVIAGPEVD GNFKLAARNI PNIDVLPNAG LNVYDVLRRH TLVLTKDAVE AISARFAEKE AA
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