Gene Caul_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1608 
Symbol 
ID5899063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1698589 
End bp1700253 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content70% 
IMG OID641562097 
Productcyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001683235 
Protein GI167645572 
COG category[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG0492] Thioredoxin reductase
[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.364295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCA TGGACACCCG TCGCGACCAG ATGTTCCCCA GCCTCAAGGC CGAGGAGATC 
GACCGCATCC GCCGGTTCGG CGAGATCGCC CACGCCAAGG CCGGCGACGC TCTGGCCCGG
TCCGGCGAGG TCTCGCCCGG GTTGATGGTC TTGCTCAATG GCGCCGCCCG GGTCACCCGC
CGCGACGCCA ACAACGACAG CCACGTCGTC GTCGAACACG GTCCCGGCAA CTTCATCGGC
GAGTTGGCCC AGTTGTCGGG CCGCCCGTCC CTGGTCGATG TCCACGCCCT GACCGACCTG
GCGGTGCTGT GCATCAAGCC CGAGCGCCTC CGCGCGGTGT TGATCGCCGA GGCCGAGCTG
GGCGAGCGGA TCATGCGGGC CCTGATCCTG CGCCGGGTCG GCCTGCTCGA GACCGGGGCC
GGCGGGCCGG TGATCATCGG CCGCACCGGT GACGGCGTGG TCATCCGACT GAGCGGCTTC
CTGGGCCGCA ACGGCCATCC CTACCAGCAT CTGGATCCCG ACAAGGTCGA CTGCGCCAAG
GTGCTGATCG AGCGGTTCTC GATCGACGAG GCCGAACTTC CGATCGTGCT GTGCCCCGGC
GGCCAGATCC TGCGCCATCC GTCCAACGCC GAGCTGGCCC GCTGCATCGG CATGGTCGGC
AAGCTGGATC CCGACCAGGT CTTCGACGTG GCCGTGGTCG GGGCCGGGCC GGCGGGGCTG
GCGACGGCGG TCTATGCCGC CTCGGAAGGT TTGTCGGTGC TGGTGCTCGA CACCCGGGCG
TTCGGCGGCC AGGCCGGCGC CTCGGCGCGG ATCGAGAACT ATCTGGGCTT CCCCACCGGC
GTGTCGGGCA TGGCCCTGAT GGCCCGCGCC TACAACCAGG CCCAGAAATT CGGGGCCAAC
CTGGCCATCC CCGACGAAGT GGCGGCGCTG GATTGCGAGG GCGACTCCAA GGCGGGGGGC
CTAAGCGGCT ATCTGCTGAA GCTGACCAGC GGCGAGACCA CCCAGGCCAA GACCGTGGTG
ATCGCCAGCG GCGCCCGTTA CCGCCGGCTG GAGGTTTCCA ATCTCGACCA GTTCGAGGGC
AGCAGCGTCC ACTACTGGGC CTCGCCGCTC GAGGCCAAGC TGTGCGCGGG CCAGGAGGTC
GCCCTGGTGG GGGCCGGCAA TTCGGCGGGC CAGGCGGCGG TCTATCTGGC CAGCCAGGTG
GCCAAGGTCT GGCTGGTGAT CCGCGGCAAG AGCCTGGACG CCAGCATGTC GCGCTACCTG
ATCGACCGGA TCGAGAGCCT GCCCAATATC GAGGTGGTCA CCCGCAACGA GATCGTCGAG
CTGGAGGGCG AGGACGGCCA ATTGCGCGCG ATCCGCCACC GCGATCTCGA CACCGGCGAG
GAGGATCGCT GCGAGATCAG CCACCTGTTC CTGTTCATCG GCGCCGCCCC CAACACCGCC
TGGCTGGCCC AGTGCCATGT CGAGCTCGAC AACCACGGCT TCGTGCGCAC GGGTCCCGAC
CTGACGCCGG GGCATCCGCC CTTGCAGACC AGCCGCCACG GCGTGTTCGC GATCGGCGAC
GTGCGAGCCG GCTCGGTCAA GCGCGTGGCG GCGGCGGTCG GCGAAGGCGC CCAGGTGGTG
GCGGCGATCC ACGCCTATCT GTCGGAGCCG GTGACGACGG CGTGA
 
Protein sequence
MAIMDTRRDQ MFPSLKAEEI DRIRRFGEIA HAKAGDALAR SGEVSPGLMV LLNGAARVTR 
RDANNDSHVV VEHGPGNFIG ELAQLSGRPS LVDVHALTDL AVLCIKPERL RAVLIAEAEL
GERIMRALIL RRVGLLETGA GGPVIIGRTG DGVVIRLSGF LGRNGHPYQH LDPDKVDCAK
VLIERFSIDE AELPIVLCPG GQILRHPSNA ELARCIGMVG KLDPDQVFDV AVVGAGPAGL
ATAVYAASEG LSVLVLDTRA FGGQAGASAR IENYLGFPTG VSGMALMARA YNQAQKFGAN
LAIPDEVAAL DCEGDSKAGG LSGYLLKLTS GETTQAKTVV IASGARYRRL EVSNLDQFEG
SSVHYWASPL EAKLCAGQEV ALVGAGNSAG QAAVYLASQV AKVWLVIRGK SLDASMSRYL
IDRIESLPNI EVVTRNEIVE LEGEDGQLRA IRHRDLDTGE EDRCEISHLF LFIGAAPNTA
WLAQCHVELD NHGFVRTGPD LTPGHPPLQT SRHGVFAIGD VRAGSVKRVA AAVGEGAQVV
AAIHAYLSEP VTTA