| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1602 |
|---|
| Symbol | |
|---|
| ID | 5899057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 1691510 |
|---|
| End bp | 1692736 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641562089 |
|---|
| Product | Bcr/CflA subfamily drug resistance transporter |
|---|
| Protein accession | YP_001683229 |
|---|
| Protein GI | 167645566 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.940845 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG CCGCCCAGCC CGTTCCCGCC GTCATCCCCT GGCGGCTCGT CCTGATGCTC
GGCGCTCTGA CCGCCTTCGC CCCGATGTCG ATCGACATGT ACCTGTCGAG CATGCCCGAG
ATCGGCCGGC GGCTGCACGC CGGGGCCGAC GACGTCCAGG CCACCCTGGC GGCCTTCTTC
GCCGGCATGG CCATCGGGCA ATTCCTCTAT GGACCGGCGT CGGACCGTTT CGGTCGCCGG
CCGCCGTTGC TGCTGGGCAT CGGCATCTAT GTCGCCGCCT CCGTGGTTTG CGCCCTGGCC
CCCTCCATCG AGGTGCTGAT CGCCGCCCGC TTCGTCCAGG CCCTGGGCGG CTGCGCGGGG
GCGGTGGTGG CGCGGGCGGT GGTCCGTGAC CGCTTCAACC ACGCCGACAC GGCCCGCGTG
CTGTCGCTGA TGACCTTGAT CATGGGCCTG GCCCCGGTGC TGGCCCCGCA GCTGGGCGGG
GTGATCCAGT TCTTCGCCGG CTGGCGGGGC GTGTTCTGGT CGCTCGTGGT GTTCGGCCTG
CTGATCGGCC TGTGGATCGC CCTGGGCCTG AGCGAGAGCC GCTCCGAGGC CACCGCCGTC
CAGGCCCGCT CGGAGAACCC GTTCAAGGCC TATGGCGCGC TGCTGAGCCA GAAGCGGCTG
GTCGGCTACG GCCTGGCGGG GGCCCTGAAC GGCGCGACCC TGTTCACCTA CATCTCGACC
GCCCCGGACC TGGTGATGGG GACCTATGGC CACACGCCGC TGGTGTTCAA CCTGATCTTC
GCCTTCAACG CCGTGGGCAT CATCGGGGCC AGCCAGGTCA ACCGGCTGCT GCTGCGTCGC
GCGACGCCGG ACAGGGTGCT GGTGCGGGCC AGCATCGCCT CGATCGTCGC CGCCTTCCTG
CTGGCCGCCG CCGCCTGGAC CGGAGTGGGC GGACAGTTCA CGGTCCTGCC GCTGCTGTTC
GCCGCCCTGT CGAGCTACGG CCTGATGGCC GGCAACACGA TGGCCGGGGC GCTCAGCGTC
GATCCCAAGC GCGCCGGTTC GATCTCGGCC CTGATGGGCG GAGCCTCGTT CGCGGCCGGC
GCCCTGGCCG CGTGGATCGG CGGCCTGCTG CATGACGGCA CGGCCCGCCC CGTGGCGGCG
GTGATGTTCG CCTGCCTGAT CGGCTCCAGC CTGGCGATCT TCGGCCTGGC GGTCCCGAAG
GGGTTGCGGG GCAAGGCGAG GGTTTGA
|
|---|
| Protein sequence | MTDAAQPVPA VIPWRLVLML GALTAFAPMS IDMYLSSMPE IGRRLHAGAD DVQATLAAFF
AGMAIGQFLY GPASDRFGRR PPLLLGIGIY VAASVVCALA PSIEVLIAAR FVQALGGCAG
AVVARAVVRD RFNHADTARV LSLMTLIMGL APVLAPQLGG VIQFFAGWRG VFWSLVVFGL
LIGLWIALGL SESRSEATAV QARSENPFKA YGALLSQKRL VGYGLAGALN GATLFTYIST
APDLVMGTYG HTPLVFNLIF AFNAVGIIGA SQVNRLLLRR ATPDRVLVRA SIASIVAAFL
LAAAAWTGVG GQFTVLPLLF AALSSYGLMA GNTMAGALSV DPKRAGSISA LMGGASFAAG
ALAAWIGGLL HDGTARPVAA VMFACLIGSS LAIFGLAVPK GLRGKARV
|
|---|
| |