Gene Caul_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1590 
Symbol 
ID5899045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1678131 
End bp1680608 
Gene Length2478 bp 
Protein Length825 aa 
Translation table11 
GC content74% 
IMG OID641562078 
ProductATP-dependent helicase HrpB 
Protein accessionYP_001683218 
Protein GI167645555 
COG category[L] Replication, recombination and repair 
COG ID[COG1643] HrpA-like helicases 
TIGRFAM ID[TIGR01970] ATP-dependent helicase HrpB 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.357448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTGATTT CCCGGGTCGC CCTTAAACCA CGCCGCGTGA CCCTTCCCAT CCACGAAGCC 
TTGCCGGCCT TGAAGGCCGC GCTCGTCCAG CGCGAGGCCG CCGTGCTGGT CGCGCCGCCC
GGCGCGGGCA AGACCACGGT CGTGCCGCTG GCGCTGCTGG GCGAGTCGTG GGTGGCCGGC
GGCAAGATCG TCATGCTGGA GCCGCGACGG CTGGCGGCCC GCGCGGCGGC CTCGCGGATG
GCCCAGACCC TTGGCGAAAG CGTCGGCGAT ACGGTCGGCT TCCGGGTGCG CCTGCAGTCC
AAGGTCTCCG CACGGACAAG GATCGAGGTG GTGACCGAGG GCGTGTTCAC CCGGATGATT
CTCGACGATC CGGGCCTGGA CGGCGTAGCG GCGGTGATCT TTGACGAGTT CCACGAACGC
AGCCTGGACG CCGACCTGGG CCTGGCCCTG GCCCGCGACG CGCAAGGGTT GGTGCGCGAG
GACCTGAAGA TCCTGGTGAT GTCGGCCACC CTGGACGGGG CGCGGATCTC GGCGCTGCTG
GATGACGCCC CGGTGGTCGA GAGCCAGGGG CGGATGTTCC CGGTCGACAC CCGTTATCTG
GGCCGCGACG AGCGCCAGCG CTTGGAAGAG CGCGTCGTTC GGGCGGTCGA GCGGGCCCTG
GCCGAGGAGA GCGGCAGTTT GCTGGTCTTC CTGCCGGGCC AGGGCGAGAT CCGGCGGACC
GAGACGATGT TGCGCGAACG GCTGCGGCGG CCGGAGGTCG ATGTCGCCCC GCTCTATGGC
GCGCTGGACC CGGCCGAGCA GGACCGCGCC GTCACCGCCG CCCAGCCGGG CCGTCGCAAG
GTGGTGCTGG CGACCTCCAT CGCCGAAACC AGCCTGACCA TCGAGGGCGT GCGGGTGGTG
ATCGACTGCG GCCTGGCCCG CGTGCCGCGC TTCGACCCGT CCAGCGGCCT GACCCGGCTG
GAGACCGTGC GAGTCAGTCG CGCCGCCGCC GATCAGCGCC GGGGTCGGGC CGGCCGCACC
GAGCCGGGGG TCTGCTACCG CCTATGGGAC GAGGCCGAGA CTCGGGCCTT TCCGGCCTTC
GCCCGGCCCG AGATCCTCGA GGCCGACCTG TCGAGCCTGG CCTTGAACCT GGCCCGCTGG
GGGGCTCGCG ACGCTGCCGG CCTGGCCTTC CTCGACAAGC CGCCGACGGC CGCCTTCACC
GAAGCGCGGA CCCTGCTCAA CCGCCTGCAG GCCCTGGACG GGCAGGGCGG CCTGACCGCT
CACGGCCGGG CGCTGGCCGA TATGCCGCTG GCCCCGCGCC TGGCCCACAT GGTGGTGCGC
GCCGCCGCCT CGGGCCAGGC CGAGCGGGGG GCGAAGATCG CCGCCGTGCT CAGCGAGCAG
GGGTTGGGCG GTCGCGACGT CGACCTGCGC CATCGGCTCG AGAGCTTCGA CCGCGACCGT
TCGCCCAGGG CTCGCGACGC CCGGACGCTG TCGGAGCGCT GGGCGCGCAA CGCCGGACGC
TCGACCGGCG CGACGCGGTT GGACGACGCC CTGCTGCTGG CTGAGGCCTA TCCCGAGCGG
GTGGCCCGGG CTCGCGGCAA GCCGGGCGAG TACCAGCTGG CCGGCGGGCG CGGGGTCTAT
CTGGAGCCGA CCGACGCCCT GGCCCGCGAG ACCTGGCTGG CCGTGGGCGA GCTGGGCGGC
GGCGAGGCCC GCGACCGGAT CCTGTTGGCC GCCCCGCTCG ACGAGGTGGC TCTGCGCGAG
GCCTTCGCGG ATCGGTTGGT CGCCGAGGAT CGGCTGGAGC CCGACGCCCG GGGCAAGGTG
CGGGCTCGCC GCCTGCTGCG CCTGGGCAAG CTGGTGGTCG AGGAGCGGCT GCTTGAAAAG
GTCGATCCGG CGCTGGTGGC CAAGGCCTTG CTGGGCCAGG TGGAGCGCGA GGGCCTGTCG
GCCGTGCCGC TGGGGGAGGG CGCCCAGGCC CTGCGCCGCC GCGTGGCCTT CCTGCGTGAC
CGTGACGCCG AGACCTGGCC GGACCTGTCG GACGCGGCGC TGCTGGCGCG CCTGCCCGAA
TGGCTCGAGC CCTTGCTGGT CGGCCGCTCG GCCCTGAGCC AATTGGGCGA CGGGGCTCTG
ACCGACGCCC TCCGCACCTT GGTTCCGTGG GATCTGCACC GCCGCCTCGA CGCCGAGGCC
CCGGCCCGGT TCACCGCCCC GACCGGCTCC AGCTTCGCCA TCGACTACGC CGCCGACGGC
GGGCCGCGCG TCGATGTGCG GGTGCAGGAG CTGTTCGGCC TGACGTCGCA CCCGGCGGTG
GCTGGCGTGC CGCTGGTGCT GGCTCTGCTG TCGCCGGGCC ACAAGCCGAT CCAGATCACG
CGGGATCTGC CGGGGTTCTG GAAGGGGTCA TGGCGCGAGG TGAAGGCCGA GATGAAGGGG
CGCTATCCTC GGCACGTCTG GCCGGATGAC CCGGCGGCTG CGGCGCCGAC GACGCGGGCG
AAGCCTCGGG GGACCTGA
 
Protein sequence
MVISRVALKP RRVTLPIHEA LPALKAALVQ REAAVLVAPP GAGKTTVVPL ALLGESWVAG 
GKIVMLEPRR LAARAAASRM AQTLGESVGD TVGFRVRLQS KVSARTRIEV VTEGVFTRMI
LDDPGLDGVA AVIFDEFHER SLDADLGLAL ARDAQGLVRE DLKILVMSAT LDGARISALL
DDAPVVESQG RMFPVDTRYL GRDERQRLEE RVVRAVERAL AEESGSLLVF LPGQGEIRRT
ETMLRERLRR PEVDVAPLYG ALDPAEQDRA VTAAQPGRRK VVLATSIAET SLTIEGVRVV
IDCGLARVPR FDPSSGLTRL ETVRVSRAAA DQRRGRAGRT EPGVCYRLWD EAETRAFPAF
ARPEILEADL SSLALNLARW GARDAAGLAF LDKPPTAAFT EARTLLNRLQ ALDGQGGLTA
HGRALADMPL APRLAHMVVR AAASGQAERG AKIAAVLSEQ GLGGRDVDLR HRLESFDRDR
SPRARDARTL SERWARNAGR STGATRLDDA LLLAEAYPER VARARGKPGE YQLAGGRGVY
LEPTDALARE TWLAVGELGG GEARDRILLA APLDEVALRE AFADRLVAED RLEPDARGKV
RARRLLRLGK LVVEERLLEK VDPALVAKAL LGQVEREGLS AVPLGEGAQA LRRRVAFLRD
RDAETWPDLS DAALLARLPE WLEPLLVGRS ALSQLGDGAL TDALRTLVPW DLHRRLDAEA
PARFTAPTGS SFAIDYAADG GPRVDVRVQE LFGLTSHPAV AGVPLVLALL SPGHKPIQIT
RDLPGFWKGS WREVKAEMKG RYPRHVWPDD PAAAAPTTRA KPRGT