| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1589 |
|---|
| Symbol | |
|---|
| ID | 5899044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 1676272 |
|---|
| End bp | 1677891 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641562077 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_001683217 |
|---|
| Protein GI | 167645554 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.984032 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCGCG TTAAGTCACT GGATGCGATT CTAGCCACGG CCAAGAAGAA GTCGTTGCAT
CGCTCGCTCG GCCCCATTCA GCTCACGCTT CTGGGCGTCG GCGCCATCAT CGGCACCGGC
ATCTTCGTCC TGACCGCCGC CGCGGCCCAG AAGGCGGGCC CGGGCATGAT GTGGAGCTTC
GTGATCGCCG GCGCCGTCTG CGCCATCGCC GCGCTCTGCT ATTCGGAACT GGCCTCGATG
TTGCCCGTGT CGGGCTCGGC CTACACCTAC ACCTACGCGG TGATGGGCGA ATTGCTGGCC
TGGATGGTCG GCTGGGCGCT GATCCTCGAA TACGCCGTGG CCGCCAGCGC CGTGTCGGTG
GGGTGGTCGG GCTATTTCCT CGGACTCATA GAAAACGCCC TGCACTTCCA CTGGCCTGAC
GCCCTGCGCG CCGGTCCAGC CTGGTCGATG AACGGCTTCA TGCCGGTGGC CGACTTCAGC
GCTGGCGTCG TCAACATCCC GGCCATCCTG GTGGCCCTGA CCGTGACCGC CCTGCTGGTT
CGCGGCACGA CCGAAAGCGC CCGCGTCAAC GCCGTGCTCG TCGTGATCAA GGTGACGGCC
CTGACCGCCT TCGTCATCCT GACCATTCCG GTGATCAAGA CCGGCAACTT CTCGCCCTTC
ACCCCCAACG GCTGGTTCGG CCCGCACGGA ACGACGGGCA TGGGCGTGGT CGGCGCCGCC
GCTTCGATCT TCTTCGCCTA TGTCGGCTTC GACGCGGTCT CCACCGCCGC CGAAGAGACC
AAGAACCCCC AACGTAACGT GCCGATCGGC CTGATCGGCA GCCTGGGCAT CTGCACCATC
TTCTACCTGT TGGTCGCGGC CGGCGCGGTT GGCGCCATCG GCGCTCAGCC CGTCATCGGC
GCGGCCGGTG AAGCCGTGCA ACCCGGCTCG GCCGCCTTCC AAGCGGCCTG CGGCCTGGCT
TCGAACGCCG ACCGCCTGGT CTGCTCGAAC GAGGCCCTCG CCCACGTCCT GCGCAAGATC
AACTTCCCGG TGGTCGGCAA CCTGCTGGGC CTGGCCGCCA ACCTGGCCCT GCCCTCGGTC
ATTCTGATGA TGATCTACGG CCAGACCCGC ATCTTCTTCG TCATGGCCCG CGACGGCCTG
CTGCCGGAGA AACTGGCCGC CATCCACCCC AAGTGGAAGA CGCCGCACAT CGTCACCATC
GCCACCGGCA TCTTCGTGGC CATCGCCGCC GCCTTCTTCC CGGTGGGCCA ACTGGCCGAC
ATCTCCAACT CCGGCACGCT GTTCGCCTTC TTCATGGTGG CGATCGCGGT GATGGTGCTG
CGCTACAAGG ATCCGAACCG TCCGCGTCCG TTCAAGACCC CGGCGATCTG GATCGTGGCG
CCGGTGGCGA TGATCGGTTG CGCGGGCCTG TACTTCAACC TGCCGCTGGA ATCGATGCTG
GTGCTGCCGA TCTGGGGCGC TCTGGGCCTG GTGATCTATT TCGCCTACGG GTTCCGCAAG
AGCCACGTCG GCCGCGGCAT CACCGACGAG GTCCACGAAC TGGACCCCGA CGCGCCGGCG
ACGGGCGTGG CCCCGATGCC GGGCGCTCCG GCCCCGGGCT CGCCCGACGA ACGGTCTTGA
|
|---|
| Protein sequence | MWRVKSLDAI LATAKKKSLH RSLGPIQLTL LGVGAIIGTG IFVLTAAAAQ KAGPGMMWSF
VIAGAVCAIA ALCYSELASM LPVSGSAYTY TYAVMGELLA WMVGWALILE YAVAASAVSV
GWSGYFLGLI ENALHFHWPD ALRAGPAWSM NGFMPVADFS AGVVNIPAIL VALTVTALLV
RGTTESARVN AVLVVIKVTA LTAFVILTIP VIKTGNFSPF TPNGWFGPHG TTGMGVVGAA
ASIFFAYVGF DAVSTAAEET KNPQRNVPIG LIGSLGICTI FYLLVAAGAV GAIGAQPVIG
AAGEAVQPGS AAFQAACGLA SNADRLVCSN EALAHVLRKI NFPVVGNLLG LAANLALPSV
ILMMIYGQTR IFFVMARDGL LPEKLAAIHP KWKTPHIVTI ATGIFVAIAA AFFPVGQLAD
ISNSGTLFAF FMVAIAVMVL RYKDPNRPRP FKTPAIWIVA PVAMIGCAGL YFNLPLESML
VLPIWGALGL VIYFAYGFRK SHVGRGITDE VHELDPDAPA TGVAPMPGAP APGSPDERS
|
|---|
| |