Gene Caul_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1554 
Symbol 
ID5899009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1643415 
End bp1644044 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content65% 
IMG OID641562042 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001683182 
Protein GI167645519 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.657914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGTCG GGACCTCGTC ATTCACGTCG CAAGCTCGTC GGTCTCTCCG CGTGACCTCC 
CCGGAGCCAG AGCGAGATCC GCTGATCCAC GATCGCTTGA TCGAGGCGGT GGCGCTGCGG
CGCGACCGCG AGGCCTTCGC CCAGCTCTTC AGCTATTTCG CCCCCCGCCT TAAGGCCTGG
CTGATCAAGT CCGGGGCCGC GCCTAGCGCG GCCGAAGACT TCGCCCAGGA CGCCATGCTG
ACCGTCTGGC GCAAGGCGAG CCTCTTCGAT TCCCGCAAGG CCCGGGCTGC GACCTGGATT
TTCACCATCG CCCGCAACCG TCGCCTCGAC ATGTTGCGCC GCGACGCCCG TCCCCTGCCG
ACGCCCGAGA TCGAATTGAC CGGCGAAGCC GTTCCCCGCC CCGATGACGT CCTGTCGATG
TCCGAGGACG CTGAACGGGT GCGCGAGGCC CTGTCGCGTC TCGACCCCCA ACAGTTGGAG
GTTCTGCGCC ACGCCTTCTT CATGGAAAGC CCTCACTCCG AAATCGCCCG TCACCTCAAC
CTGCCTCTGG GCACCGTCAA ATCCCGCATT CGCAACGCCA TGATCAAACT TCGCCTCATC
CTCGAACCGT CGCAGGAGGC GTCTCGATGA
 
Protein sequence
MHVGTSSFTS QARRSLRVTS PEPERDPLIH DRLIEAVALR RDREAFAQLF SYFAPRLKAW 
LIKSGAAPSA AEDFAQDAML TVWRKASLFD SRKARAATWI FTIARNRRLD MLRRDARPLP
TPEIELTGEA VPRPDDVLSM SEDAERVREA LSRLDPQQLE VLRHAFFMES PHSEIARHLN
LPLGTVKSRI RNAMIKLRLI LEPSQEASR