Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1554 |
Symbol | |
ID | 5899009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 1643415 |
End bp | 1644044 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641562042 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001683182 |
Protein GI | 167645519 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.657914 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGTCG GGACCTCGTC ATTCACGTCG CAAGCTCGTC GGTCTCTCCG CGTGACCTCC CCGGAGCCAG AGCGAGATCC GCTGATCCAC GATCGCTTGA TCGAGGCGGT GGCGCTGCGG CGCGACCGCG AGGCCTTCGC CCAGCTCTTC AGCTATTTCG CCCCCCGCCT TAAGGCCTGG CTGATCAAGT CCGGGGCCGC GCCTAGCGCG GCCGAAGACT TCGCCCAGGA CGCCATGCTG ACCGTCTGGC GCAAGGCGAG CCTCTTCGAT TCCCGCAAGG CCCGGGCTGC GACCTGGATT TTCACCATCG CCCGCAACCG TCGCCTCGAC ATGTTGCGCC GCGACGCCCG TCCCCTGCCG ACGCCCGAGA TCGAATTGAC CGGCGAAGCC GTTCCCCGCC CCGATGACGT CCTGTCGATG TCCGAGGACG CTGAACGGGT GCGCGAGGCC CTGTCGCGTC TCGACCCCCA ACAGTTGGAG GTTCTGCGCC ACGCCTTCTT CATGGAAAGC CCTCACTCCG AAATCGCCCG TCACCTCAAC CTGCCTCTGG GCACCGTCAA ATCCCGCATT CGCAACGCCA TGATCAAACT TCGCCTCATC CTCGAACCGT CGCAGGAGGC GTCTCGATGA
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Protein sequence | MHVGTSSFTS QARRSLRVTS PEPERDPLIH DRLIEAVALR RDREAFAQLF SYFAPRLKAW LIKSGAAPSA AEDFAQDAML TVWRKASLFD SRKARAATWI FTIARNRRLD MLRRDARPLP TPEIELTGEA VPRPDDVLSM SEDAERVREA LSRLDPQQLE VLRHAFFMES PHSEIARHLN LPLGTVKSRI RNAMIKLRLI LEPSQEASR
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