Gene Caul_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1517 
SymbolpyrB 
ID5898972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1610128 
End bp1611135 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content70% 
IMG OID641562004 
Productaspartate carbamoyltransferase catalytic subunit 
Protein accessionYP_001683145 
Protein GI167645482 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.726212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCA AAGCCCCCCC CGCTCCTCAT GACCCCGCGA GAGCGATCGA TCCGATCCTC 
GAGCGCATCT TTTCCTTCCC CCGGCGCCAC TTCCTGTCGG CCGGCGACCT GAACGCCCCG
CAGGCCACCG ATCTGCTGGA CCTGGCCGAC GCCTTCGTCG CCTTCAACCG CCAGACGTCC
AAGTCCCTCG ACATCCTCAA GGGCCGGACG CTGATGAACC TGTTCTTCGA GAACAGCACC
CGCACCCAGA GCTCGTTCGA GATCGCCGGC AAGCGCCTGG GCGCCGACGT GGTCAACATG
AGCCCGCGCA CCTCGTCGAT CACCAAGGGC GAGACCCTGA TCGACACCGC CGTGACCCTG
AACGCCATGC GGCCCGACCT GCTGGTGGTG CGCCACGCCT CGTCGGGCGC GGCGTCGCTG
CTCAGCCAAA AGGTCAGCGG CAGCGTCATC AACGCCGGCG ACGGCCAGCA CGAGCACCCC
ACCCAGGCGG TGCTGGACGC CCTGTCGATC CGCCGCGCCT TCGGCCGGGT CTCGGGCCTG
ACCGTGGCGA TCTGCGGCGA CGTGCTGCAC AGCCGCGTGG CCCGCTCGAA CGTCGCCCTG
CTGCACACGC TGGGCGCCAG CGTTCGGCTG GTGGGACCAC CGACCCTGAT GCCGGCCCAG
GCCGAGCGCT GGGGCGTCAC CGTCCATCAC GACATGAAGG CCGGCATCGC CGGGGCCGAC
GTGGTGATGA TGCTGCGCCT GCAGCTGGAG CGCATGCAGG GGGCGTTCGT GCCCTCGACC
CGCGAATATT TCCGCTTCTA CGGCCTGGAC CGCGAGAAGC TGGCCCGCGC CGCGCCCAAG
GCCAAGGTCA TGCACCCGGG TCCGATGAAC CGGGGCGTCG AGATCGATTC CGACGTCGCC
GACGATCCCG AGATCAGCCT GATCCAGGAC CAGGTCGAGA TGGGCGTCGC CGCCCGCATG
GCCGTCCTGG CCAGCCTGGC CCACCGGCTC GAGGAGCACG GTCAGTGA
 
Protein sequence
MTAKAPPAPH DPARAIDPIL ERIFSFPRRH FLSAGDLNAP QATDLLDLAD AFVAFNRQTS 
KSLDILKGRT LMNLFFENST RTQSSFEIAG KRLGADVVNM SPRTSSITKG ETLIDTAVTL
NAMRPDLLVV RHASSGAASL LSQKVSGSVI NAGDGQHEHP TQAVLDALSI RRAFGRVSGL
TVAICGDVLH SRVARSNVAL LHTLGASVRL VGPPTLMPAQ AERWGVTVHH DMKAGIAGAD
VVMMLRLQLE RMQGAFVPST REYFRFYGLD REKLARAAPK AKVMHPGPMN RGVEIDSDVA
DDPEISLIQD QVEMGVAARM AVLASLAHRL EEHGQ