| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1502 |
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| Symbol | |
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| ID | 5898957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | - |
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| Start bp | 1595911 |
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| End bp | 1598244 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641561989 |
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| Product | ribonuclease R |
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| Protein accession | YP_001683130 |
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| Protein GI | 167645467 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.68898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0835717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAC CGCGCTCGCC CAAGTCGTCC AAGTTCCCCG CCGCTTCGAA AGGCGTGAAG
GCTCCCAAGC CGCCCGCCGG CTTGCCCGAT CGCGAGACGC TGATCGCCTT CCTGCGCGAC
GCCGGCGAGG CGGCCAAGGC CGACATCGCC CGCCACTTTG GCCTCAAGGG CGCCGACCGC
CGGGCCTTGC GCGAGATGCT GCGCGAACTG GAAGCCCAGG GCGCGCTGGG CAAACGCGGA
CGGCGCGGCT TCGCCGAAGC CGGCGCCCTG CCTCCCGTGG GCGTGGCCGA CGTGGTCGAA
CGCGACGCCG ACGGCGACCT CTATGTGCGC CTGACCAAGG GCGGCGAGGA CCTGCCAATG
GTGCGCCTGG TCCCGGGCAA GGGCGACGCC GCCGCCGGCG GCGCGCCGGG CATGGGCGAC
CGCCTGTTGG TGCGTTTCGA ACAGCTGGAG AGCGGCGAGA CCGAGGCCCG GCTGATCAAG
CGCCTGGGCC AGAGCGCCCA CAAGGTGCTG GGGGTCATCC GCAAGGTCCG GCGCGAGACC
CGCGTCGAGC CGGTCGACCG CAAGTCCAAG GAAAGCCTGC TGCTCAACGA GCAGGAGGCC
AAGGACCTCA AGGACGGCGA CCTGGTCCTG GCCCAGGTCG GCACGTCGTC TGGCCGCTAC
GGACCCAAGT TCGGCAAGGT GCTGGAGGTG GTCGGCAACG AGGACGATCC ACGCGCCGCG
TCGCTGATCG CCATCCACAG CCACGGCATC CCCACCGGCT TCTCGGAAGA CGCCGAGGCG
GAAGCCCACG CCGCCAAGCC GCCCACCCTG GAAGGCCGCG ACGATCTGCG CGACCTGCCG
TTCGTGACCA TCGACCCGGT GGACGCCCGC GACCACGACG ACGCCGTCTA TGCCCATCCC
GATCCGGACG CCGGCAATGT GGGCGGCTGG ATCGTCTGGG TGGCCATCGC CGACGTCGCC
GCCTATGTGC GCCCCGGCTC GGCCCTGGAC CGCGACGCCC GCGAGAAGGG CAACAGCGTC
TACTTCCCCG ACCGGGTGGA GCCGATGCTG CCCGAGACCC TCTCGAATGG CCTGTGCAGC
CTGCGCGAGG GCGAGAACCG CGCCACCCTG GCCGTGCGGA TGGTGTTCGA CAACGACGGC
CGCAAGAAGA GCCACAAGTT CGTGCGCGGC CTGATGCGTT CGGCCGCCAA GCTGTCCTAC
GAGCAGGCCC AGGCCGCCAT CGACGGGATA GCCCCGCCCG ACGGCCAGGA CGGCGACAAG
GCCGGCCCGC TGCTGGATCC GATCCTGCGC CCCCTGTGGG CCGCCTTCCG CCTGATGGGC
AAGGGTCGCG CCCAGCGCTC GCCCCTGGGC ATCGAAAGCG ACGAGCGCCG CATCATCATC
AAGGACGGCG AGATCCAGTC GATCACCCGC CGCGCCAGCC TCGAGGCCCA CAAGCTGATC
GAGGAGATGA TGATCCAGGC TAACGTCTGC GCCGCCGAGA GCCTGGAAGC CAAGCGCACG
CCGCTGATCT ACCGGGTGCA CGATACGCCC AGCCAGGAAA AGGTCATGAG CCTGGTCGAG
TTCCTGCAGA CGATCGAGGT CAAGTGGTCC AAGGGCGAGG CCCCGACCAC GGCGCGCTTC
AACAAGCTGC TGGACGACAC CCGCGAGAGC CCGCACGCGG CGATCATCAA CGAGGTGGTC
CTGCGCACCC AGATGCAGGC CCACTATTCC AGCGACAACC TGGGCCACTT CGGCCTGAAC
CTGGCGCGCT ACGCCCACTT CACCAGCCCG ATCCGTCGCT ATGCCGACCT GATCGTCCAC
CGGGCCCTGA TCCGCGCTCT GAAGCTGGGC GACGACGGCC TGACCGACCA GGACATCTCG
CAGATCAAGG ACACCGCCGA GGTCATCACC CACGCCGAGC GCCGGGCCAT GGCCGCCGAG
CGCGACGCCA CCGACCGCTA TATCGCCGCC TTCCTGTCCG ACCGGGTGGG CGCGACCTTC
AGCGGCCGGA TCACCGGCGT CACCCGCTTT GGCCTGTTCG TGAAGCTGGA CGAGACGGGC
GCCGATGGCC TGGTGCCGGT CTCGACCCTG GGCGAGGAAT ATTTCGTCCA CGACGACCGC
ATGCACGCCC TGGTCGGCGA GCGCACCGGC AAGCGCTTCC CCCTGGGCCT GGCGGTCGAG
GTCAAGCTGC GCGAGGCCAC GCCGGTGACC GGCGGCCTGC TGTTCGAGAT GCTGACCGAG
GCGTTGCCGA ATGACCCGAA GGCGCCGCGG CCCAGGCTCG GCGTGCGGGC CAGGCCTGCG
GTCAAGCCGC GCGGCGGGTT GCCGAAGGGC GTGCGGCGAG GCAAGCGGCG GTAA
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| Protein sequence | MAKPRSPKSS KFPAASKGVK APKPPAGLPD RETLIAFLRD AGEAAKADIA RHFGLKGADR
RALREMLREL EAQGALGKRG RRGFAEAGAL PPVGVADVVE RDADGDLYVR LTKGGEDLPM
VRLVPGKGDA AAGGAPGMGD RLLVRFEQLE SGETEARLIK RLGQSAHKVL GVIRKVRRET
RVEPVDRKSK ESLLLNEQEA KDLKDGDLVL AQVGTSSGRY GPKFGKVLEV VGNEDDPRAA
SLIAIHSHGI PTGFSEDAEA EAHAAKPPTL EGRDDLRDLP FVTIDPVDAR DHDDAVYAHP
DPDAGNVGGW IVWVAIADVA AYVRPGSALD RDAREKGNSV YFPDRVEPML PETLSNGLCS
LREGENRATL AVRMVFDNDG RKKSHKFVRG LMRSAAKLSY EQAQAAIDGI APPDGQDGDK
AGPLLDPILR PLWAAFRLMG KGRAQRSPLG IESDERRIII KDGEIQSITR RASLEAHKLI
EEMMIQANVC AAESLEAKRT PLIYRVHDTP SQEKVMSLVE FLQTIEVKWS KGEAPTTARF
NKLLDDTRES PHAAIINEVV LRTQMQAHYS SDNLGHFGLN LARYAHFTSP IRRYADLIVH
RALIRALKLG DDGLTDQDIS QIKDTAEVIT HAERRAMAAE RDATDRYIAA FLSDRVGATF
SGRITGVTRF GLFVKLDETG ADGLVPVSTL GEEYFVHDDR MHALVGERTG KRFPLGLAVE
VKLREATPVT GGLLFEMLTE ALPNDPKAPR PRLGVRARPA VKPRGGLPKG VRRGKRR
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