Gene Caul_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1479 
Symbol 
ID5898934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1571283 
End bp1572485 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content66% 
IMG OID641561966 
Productaspartate aminotransferase 
Protein accessionYP_001683107 
Protein GI167645444 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0669082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTAG AGTCCGCCGC CCTGCGGCGC ATCGCCCCGT CCGCCACCAT CGCGATCAGC 
GCCAAGGCGC GCGCCCTGAA AGCGGCCGGC CGGGACGTGA TCGCCCTTTC CGCCGGCGAA
CCGGACTTCG ACACACCCGA CAACATCAAG GAAGCCGGCA TCGCCGCGAT CCGCGCGGGC
AAGACCAAGT ACACTGATCC CGACGGCATG CCCGAGCTGA AGGCCGCGAT CTGCGCCAAG
TTCAAGCGCG AGAACGGCCT GGACTACAAG CCCAGCCAGG TCCACGTCGC CCCGGGCGGC
AAGCCGGTGA TCTACAACGC CCTGGTCGCC ACCCTGGACC CGGGCGACGA GGTGATCATC
CCTGCCCCGT ACTGGGTGTC GTATCCCGAT ATGGTGCTCC TGGCCGGCGG CACGCCCGTC
GCCGTGGAGA CCACCGCCGA GAGCGGCTTC AAGCTCACGC CGGAAGCCCT GGAAAAGGCC
ATCACGCCCA AGTCGAAGTG GCTGATCATC AACAGCCCGT CCAACCCGTC GGGCGGCGCC
TATACCCGCG CCGAGCTGCA GGCCATCGCC GACGTGCTGC TGCGCCATCC GCAGGTCTGG
GTGCTGACCG ACGACATGTA TGAGCACCTA GTGTTCGACG ACTTCGAGTT CACCACCATC
GCCCAGGTCG AGCCCAGGCT CTACGACCGC ACCCTGACGA TGAACGGCGT GTCGAAGGCC
TATGCCATGA CCGGCTGGCG GATCGGCTAC GCGGCCGGCC CCGAGCCGCT GATCAAGGCC
ATGGCCAAGA TGATCAGCCA GACCACCTCC AATCCCTCGT CCATCTCGCA ATGGGCGGCG
CTGGAGGCGC TGAACGGTCC GCAGGACTTC ATCAAGCCGA ACGCCAAGCT GTTCCAGGAG
CGCCGCGACC TGGTGGTGTC GATGCTGAAC CAGGCGACCG GCATCCACTG CCCGACCCCG
GAAGGCGCGT TCTACGTCTA TCCGTCCTGC GCCGGCCTGA TCGGCAAGAC GGCGCCCAGC
GGCAAGGTCA TCGAAAGCGA CGAGGATTTC GCGGTCGAAC TGCTGGAAAC CGAGGGCGTG
GCCGTGGTGC ACGGCGCGGC GTTCGGCCTG TCGCCGTTCT TCCGCATCAG CTACGCGACA
TCCAACGACG TGCTGGAAGA CGCCTGCGCG CGTATCCAAC GCTTCTGCGG AAATGTGAAA
TAG
 
Protein sequence
MSLESAALRR IAPSATIAIS AKARALKAAG RDVIALSAGE PDFDTPDNIK EAGIAAIRAG 
KTKYTDPDGM PELKAAICAK FKRENGLDYK PSQVHVAPGG KPVIYNALVA TLDPGDEVII
PAPYWVSYPD MVLLAGGTPV AVETTAESGF KLTPEALEKA ITPKSKWLII NSPSNPSGGA
YTRAELQAIA DVLLRHPQVW VLTDDMYEHL VFDDFEFTTI AQVEPRLYDR TLTMNGVSKA
YAMTGWRIGY AAGPEPLIKA MAKMISQTTS NPSSISQWAA LEALNGPQDF IKPNAKLFQE
RRDLVVSMLN QATGIHCPTP EGAFYVYPSC AGLIGKTAPS GKVIESDEDF AVELLETEGV
AVVHGAAFGL SPFFRISYAT SNDVLEDACA RIQRFCGNVK