| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1394 |
|---|
| Symbol | alaS |
|---|
| ID | 5898849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 1483301 |
|---|
| End bp | 1485952 |
|---|
| Gene Length | 2652 bp |
|---|
| Protein Length | 883 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641561881 |
|---|
| Product | alanyl-tRNA synthetase |
|---|
| Protein accession | YP_001683022 |
|---|
| Protein GI | 167645359 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0013] Alanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGCC TGAACGAAAT CCGCAGCACC TTCCTGAACT ATTTCGGCGC GGCCGATCAC
GCCATCGTTC CCTCCGCGCC GCTGGTGCCG CAGAACGATC CGACCCTGCT GTTCGTCAAC
GCCGGCATGG TGCCGTTCAA GAACGTGTTC ACGGGCGCCG AGACCCCGCC GCATCCGCGC
GCGACCTCGT CGCAGAAGTG CGTGCGGGCC GGCGGCAAGC ACAACGACCT GGACAATGTC
GGCTACACCG CCCGCCACCA CACCTTCTTC GAGATGCTGG GCAACTTCTC GTTCGGCGAC
TACTTCAAGG AACAGGCGAT CACCCACGCC TGGACCCTGC TGACCCGCGA CTTCGCCCTG
CCCAAGGACA AGCTGCTGGT CACGGTCTAC CACACCGACA CCGAAGCCGC CGACCTGTGG
AAGAAGATCG CCGGCCTGTC CGACGACCGC ATCATCCGCA TCGCCACCAA CGACAATTTC
TGGTCGATGG GCGACACCGG CCCCTGCGGC CCGTGCTCGG AAATCTTCTT CGACCACGGC
GACCACATCC CCGGCGGCCC GCCCGGCAGT CCCGACGAGG ACGGCGACCG GTTCATCGAG
ATCTGGAACC TGGTCTTCAT GCAGTTCGAG CAGATGGCCG GCGGCGAGCG CGTCTCGCTG
CCCAAGCCGT CGATCGACAC CGGCATGGGC CTGGAGCGCA TCGCCGCCGT GATGCAGGGC
GTGCACGACA ACTACGACAT CGACCTGTTC AAGGCCCTGA TCGCCGCCAG CGTCGAACTG
ACCGGGGTGA GGGCCGAGGG CGCGCAAGCC CCGTCGCACC GGGTGATCGC CGACCACCTG
CGCTCGTCCT CGTTCCTGCT GGCCGATGGC GTCACGCCGT CGAACGAAGG CCGCGGCTAT
GTGCTGCGCC GGATCATGCG CCGCGCCATG CGCCACGCCT ATCTGCTGGG CGCGAACGAG
CCCCTGATGC ACCGCCTGGC CCCGACCCTG GTCGCGCAGA TGGGCCAGGC CTATCCGGAA
TTGCGCCGCG CCGAGGCCTC GATCGTCGAG ACCCTGCGCC AGGAGGAAGA GCGCTTCCGT
GTCACCCTCG GCCGTGGCAT GGGCCTGCTC GACGAGGCCA CGGCGGGCCT GTCGGCCGGC
GGCGTGCTGG ACGGCGAGAC CGCCTTCAAG CTCTACGATA CCTACGGCTT CCCGCTGGAC
CTGACCCAGG ACGCCGTGCG CGCCAGGGGC ATCACGGTCG ACACCGACGG CTTCGACGTG
GCCATGGACC GCCAGCGCAC CATGGCCCGC GCCAACTGGG CCGGCTCGGG CCAGACCGGC
GCCGCCGCCG CCTGGTTCGG GATCAAGGAA CAAAGCGGCC CGACCAACTT CGTTGGCTAC
GACACCACCG AGACCACCGG AACCGTGAAG GCCATCGTGC TGGACGGCGC GCCGGTCGAA
GCCGCCCAGG CCGGCGCCAG CGTCGACGTG CTGCTGGACC GCACCAGCTT CTACGCCGAG
AGCGGCGGCC AGGCCGGCGA CACCGGCGTG ATCGAGGCCC ATGGCGTCGA GAGCCGCGTG
ACGGACACCC AGAAACAGGC CGGCGACCTC TATGTGCACC GTGTCGAACT GGCCGGCCCG
CTGAAGGTCG GCGACAGCGT CGTCGCCTCG GTGGACGCCG CCAGGCGCAC CACCACCCGC
GCCAACCACT CGGCCGCCCA CCTGGTGCAC GCCGCCCTGC ACCATGTGCT GGGCCCGCAC
GTCGCCCAGA AGGGCCAGAT GGTCGATGGC GACCGCATGC GCTTCGACTT CAGCCACGGC
GGCCCGCTGA CCGCCGACGA GATCGAGCGC ATCGAGGCCG AAGTGAACGC CGTGATCCGC
CAGAACGTGC CGGCGCAGAC CAAGGAAATG GCCCCGCAGG AGGCCATCGA GGCTGGCGCC
GTGGCGCTGT TTGGCGAAAA GTACGGCGAC AGCGTCCGCG TGCTGACGCT GGGCGAGTCG
CTGACAGAGA CCGGCAAGGC CTATTCGGTC GAGCTGTGCG GCGGCACCCA CGTGGCCCGC
ACCGGCGACA TCGCCCTGTT CAAGATCGTC TCGGAGCAAG GCGTGGCCTC CGGCGTGCGC
CGCATCGAGG CCCTGACCGG CGAGGCGGCC CGCCGCTTCC TGTTGGATCA GGCCGGCGTC
GCCAAGGCCC TGGCCGACCA GTTCAAGACC CCGGTCGCCG AGGTCCTGGC CCGCGTCGAC
GCCCTGGTCG CCGAGCGCAA GGCGCTGGAG CGGCAACTGG CCGAGGCCAA GAAGCAGCTG
GCCCTGGGCG GCGGCTCGGG CGGCGCGGCT TCGGGTCCCG AAGACGTCGC CGGCACCGCC
CTGATTGCCC GCGTCCTCGA CGGCGTCGGC GGCAAGGAAC TGCGCGGCGT GGCCGAGGAG
TTCAAGAAGC AGCTGACCAA CGGCGGCGTC GTCGCCCTGG TCGGGGTGAC CGACGGCAAG
GCGGCCGTCA CCGTCGCCGT CACGGCCGAT CTCACGGCCA AGTTCAGCGC CGCCGACCTC
GCCAAGGCCG CCGTGATCGC CATGGGCGGC CAGGGCGCCG GCGGCAAGGC CGACTTCGCC
CAAGGCGGCG CCCCCGACGC GACCAAGGCC CAGGCCGGCC TGGACGCCAT CAAGGCGGCG
CTGGCCGGGT AG
|
|---|
| Protein sequence | MPSLNEIRST FLNYFGAADH AIVPSAPLVP QNDPTLLFVN AGMVPFKNVF TGAETPPHPR
ATSSQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKEQAITHA WTLLTRDFAL
PKDKLLVTVY HTDTEAADLW KKIAGLSDDR IIRIATNDNF WSMGDTGPCG PCSEIFFDHG
DHIPGGPPGS PDEDGDRFIE IWNLVFMQFE QMAGGERVSL PKPSIDTGMG LERIAAVMQG
VHDNYDIDLF KALIAASVEL TGVRAEGAQA PSHRVIADHL RSSSFLLADG VTPSNEGRGY
VLRRIMRRAM RHAYLLGANE PLMHRLAPTL VAQMGQAYPE LRRAEASIVE TLRQEEERFR
VTLGRGMGLL DEATAGLSAG GVLDGETAFK LYDTYGFPLD LTQDAVRARG ITVDTDGFDV
AMDRQRTMAR ANWAGSGQTG AAAAWFGIKE QSGPTNFVGY DTTETTGTVK AIVLDGAPVE
AAQAGASVDV LLDRTSFYAE SGGQAGDTGV IEAHGVESRV TDTQKQAGDL YVHRVELAGP
LKVGDSVVAS VDAARRTTTR ANHSAAHLVH AALHHVLGPH VAQKGQMVDG DRMRFDFSHG
GPLTADEIER IEAEVNAVIR QNVPAQTKEM APQEAIEAGA VALFGEKYGD SVRVLTLGES
LTETGKAYSV ELCGGTHVAR TGDIALFKIV SEQGVASGVR RIEALTGEAA RRFLLDQAGV
AKALADQFKT PVAEVLARVD ALVAERKALE RQLAEAKKQL ALGGGSGGAA SGPEDVAGTA
LIARVLDGVG GKELRGVAEE FKKQLTNGGV VALVGVTDGK AAVTVAVTAD LTAKFSAADL
AKAAVIAMGG QGAGGKADFA QGGAPDATKA QAGLDAIKAA LAG
|
|---|
| |