| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1340 |
|---|
| Symbol | |
|---|
| ID | 5898795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 1422573 |
|---|
| End bp | 1424132 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641561827 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_001682968 |
|---|
| Protein GI | 167645305 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGC GAAGTATCAC GGACGACGAA ATCGCTCTGA TCAAGGCGAT GAAAAAACGT
GGCATGGCCA ACAAGGACAT CCAGTTCTTT TTCAATCGCC CGGGGAGGGC GGTAAATTCA
GGTCGAATTT CGGATATCGG AAAGGGTACC TACAGCGATT GCGCGACCAT TCAGGCTGCC
TCCGATCTCG AACTGGATGG GTTCCTGTCG TCGTTCGATT CGGCAGGGGT GAGCGCCCAG
ATCCAAGTTC CGGCGGCCTC TTCGATAGAA GCCCCGGAGA CGGGGCCGGT CGATCCGAGG
GCGATCAATC GGCTGTTTGC GAAGGGGCCT GATGGGGTCT GGCGGCTCGC GCATGGCGAG
GCAGACGACC TTGAGTGCAA GGCCAACTTT GGTTTCAAGC ACTCGCACAA TTGGATCAGG
GCGATTGCTG CGCTGGCCAA CAATCGAGGC GGCTACGTGC TGTTCGGTGT CGCCGACAAA
GGGACCATCG GTCCTGCTGG CGAAGATCAT AGCCATGCTG TCGTGGGGCT GGGCTCGAAG
GACTTCGAGA ACGCCGACCC CGCTGACATC ACCAATAAGC TGCGTTCCTG CCTGGACCCG
ACCCCGCGCA TTCAGATCCG TACCCATGTG CTGGCAGGGA TCACGATTGG CGTCATCCAC
GTCGAACAGC ATCCGAGCCG GCCCGTCATC GTCACGAAAA CCGAAGGCGA CAAGATCAAG
GAAGGCGATA TTTTCTTCCG CTATCCGGGG CAGTCCATCC GCATAAAATA TAGCGATCTG
CGAGCCATCC TTGATGGGCG TGATGCGGCG GCACGTCGCG AAATCATGCC GGCCGTCGAG
CGTCTGCTGA CGCTTGGCCC GAGGCGAGCG CTCATCGCGG ATTTGGATGA GGGCACGCTT
GGCAGCGGTG GAAACCTCAT CACGATCGAC CCCGAGTTGG TGAAGCAGAT TCAGTTCGTG
AGGGAAGGGG ACTTCAAGCA GGCGGATGGC GCTGCCGCCC TTCGGCTTGT CGGTGATGTG
GTCACCGCGA CCACGACGGG TAAAATCGAG AGCCGTGGGG TTGTGACCGA CAAAATCCTG
CTTCGGAATT TCCTAGCTCG GGAAACCATC GCGAGCCCGA CGGAGTACGT GCGATTCGCT
ACCGAGGGCG CTCACGCGGC CTGGCTGCCG ATTTTCTATT TCGCGAACGC GGCAAAGCTG
GACCGAGCCG CGTTGGAGGC GTTTGTCGGG AAGCTGGATG GCGCGAAGGC AAAAAAGGAT
AGGCTGCTGA GGCGCATCAA AGGGGATGTC AGTGCATACG AACGATACAC GGGTACGCCC
GCCACTATCC TCAAGAAGCT TATGGCAGGC GACGACGTGA CGCCGACAGA CGCCAAGGGA
GCGATCAACG CCGCCATGGC TGTGTGCGGT CTGAAGGATG GTCACGGGCT TGCGGCCGAC
CAACTCCTTA GCCTTCTAAC AAGCTGCCTC GCCTTGGTGG AGGCTACGCC GACAGCGCAT
GGGCTAAGTC ATGTGCGGCG TGCCGCTTGT CGCCTTGATG AGCTATTTTA TCCGCTGTGA
|
|---|
| Protein sequence | MAKRSITDDE IALIKAMKKR GMANKDIQFF FNRPGRAVNS GRISDIGKGT YSDCATIQAA
SDLELDGFLS SFDSAGVSAQ IQVPAASSIE APETGPVDPR AINRLFAKGP DGVWRLAHGE
ADDLECKANF GFKHSHNWIR AIAALANNRG GYVLFGVADK GTIGPAGEDH SHAVVGLGSK
DFENADPADI TNKLRSCLDP TPRIQIRTHV LAGITIGVIH VEQHPSRPVI VTKTEGDKIK
EGDIFFRYPG QSIRIKYSDL RAILDGRDAA ARREIMPAVE RLLTLGPRRA LIADLDEGTL
GSGGNLITID PELVKQIQFV REGDFKQADG AAALRLVGDV VTATTTGKIE SRGVVTDKIL
LRNFLARETI ASPTEYVRFA TEGAHAAWLP IFYFANAAKL DRAALEAFVG KLDGAKAKKD
RLLRRIKGDV SAYERYTGTP ATILKKLMAG DDVTPTDAKG AINAAMAVCG LKDGHGLAAD
QLLSLLTSCL ALVEATPTAH GLSHVRRAAC RLDELFYPL
|
|---|
| |