Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1336 |
Symbol | |
ID | 5898791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 1416520 |
End bp | 1419663 |
Gene Length | 3144 bp |
Protein Length | 1047 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641561823 |
Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
Protein accession | YP_001682964 |
Protein GI | 167645301 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGCT TCTTTATCGA CAGACCCATC TTCGCGTGGG TCATCGCCAT CGTGATCATG CTGGCCGGGG CGCTCGCCAT CCGGACCTTG CCGGTCGCGC AGTATCCTGC AATCGCACCG CCCCAAGTCG CCGTCAGCGC AATGTATCCC GGCGCGTCGG CCAAGACGCT CGAAGACAGC GTCACCCAGG TCATCGAACA GAAGATGAAG GGCATCGACG GCCTGGATTA CATGTCGTCA ACGAGCGACA GCACCGGCGC TGCGACGGTC ACCCTGACTT TCAAAGCTGG CACGGATATC GACATCGCGC AGGTGCAGGT CCAGAACAAG CTGCAGACGG CTACCGCGCT GTTGCCGCAG GAAGTTCAGC AGCAAGGCCT AACCGTCGCA AAGTCGGCCC GTAACTTCCT GCTCGTGATC GGTCTCTATT CTGACAATCC GAAAACAACC AGCAACGACC TTACCGACTA TATCGCCTCC AACATCCAGG ACCCGCTGAG CCGGGTCGAT GGGGTCGGCG ACGTCCAGCT TTTCGGCGCC CAGTACGCCA TGCGCATCTG GCTCGACCCG AACAAGCTGG CGTCCTACAG CCTGACGCCG AGCGACGTGT CGGCCGCCAT CCGCGCCCAG AACGCGCAGG TTTCGGCCGG CCAGCTAGGC GGTACGCCCA ACCTGCCGGG CACGGCGCTC AACGCGACGA TCACGGCGCA GTCGCGCCTT CAGACGCCTG AAGAGTTCGA AAACATCATC CTGAAGAACA GCCAGGGCGG CGCCATTGTC TATATGCGTG ACGTCGCGCG TGTGGAGATG GGCGCGGAAA GCTACAGCGC AGCCGCGAAA TACAATGGAA AGCCCTCCGG CGGTCTGGCG ATCAAGCTGG CGCCGGGTGC CAATGCTTTG GACACGGCCA AAGCGGTCAA GGCGCAGGTT GATGAGCTGG CGAAGAATTT CCCTTCTGAA TACAAATACA TAGTTCCATA CGACTCGACG CCCTTTGTCG AACAGTCGAT CCACGAGGTG GTCAAGACGC TGATGGAGGC CATTGTGCTG GTCTTCATCG TCATGTTCCT GTTCCTGCAA AACTGGCGCG CGACGCTGAT CCCGACGATT GCCGTTCCCG TCGTCCTGCT CGGCACCTTC GGCGTGCTGG CCATGTTCGG CTACTCGATC AACACCCTCA CCATGTTCGG CCTGGTGCTG GCCATCGGCC TCCTGGTCGA TGACGCCATC GTCGTGGTCG AGAACGTCGA GCGGGTGATG TCCGAAGAGG GCCTGTCGCC CAAGGAAGCC ACCCGCAAGT CGATGAACGA GATCACCGGC GCCCTGATCG GCATCGCCCT GGTGCTGTCG GCGGTGTTCG TGCCGATGGC CTTCTTCGGC GGCTCGCAAG GCGTCATCTA CCGTCAGTTC TCGATCACCA TCGTCTCGGC GATGATGTTG TCTGTGGTGG TCGCCCTCGT GCTCACACCG GCGCTCTGCG CCACCATGCT CAAGCCTATC GCCAAGGGCC ACATGGTCGC GGAGACGGGG TTCTTCGGCT GGTTCAACCG CAGCTTCAAC GACGTCTCTG GTCGGTATCA GAACTCGGTG CGCGGCATCC TGGGCAAGAG CGTCCGCTGG ATGGCGATCT ATGCCGCCAT CATTGTGGCC ATGGGTCTGC TGTTCGTTCG CTTGCCGAGC GCCTTTCTAC CCGAAGAGGA TCAGGGGTTT ATGCTGACGC TGGTGCAGCT CCCGCCGGGT GCCACTGAGG AGCGCACTCT GGGCGTCCTC GATCAGGTCC GCAGCCACTT CATGGAGAAC GAGAAGGAGG CCGTGCAATC TGTGTTCACC GTCAACGGCT TCAGCTTCAG CGGGCCGGGG CAGAACGCAG GCCTGGCGTT CATTCGGCTC AAGAATTTCG ACGAACGAAA GTCCGCTGAT CTCAAGGTGC CGGCTCTGGC AGGTCGGGCC ATGGGTAAGT TCGCGCAGAT CCGCGATGCG ATGGTGTTCG CCATCGTGCC GCCGGCTGTC ACCGAACTGG GCAACTCTTC GGGCTTCGAT TTTCAGCTGA AGGATATTGG CGGGCTTGGC CATGAGGCCT TGGTCGCCGC CCGCAACCAG ATGCTGGGTA TGGCCGCGCA GGATCCGGCC CTGGTTGGCG TACGTCCCAA CGGTCAGGAC GACACCCCAC AGCTGAAGAT CGACATCGAC CAGGCCAAGG CCGGGGCCAT GGGCTTGACC ACGGCCGACA TCAACGCCGC GCTGAGCACG GCCTGGGGCG GTTCGTATGT GAACGACTTC GTCGATCGCG GCCGGGTCAA AAAGGTCTAT GTCCAGGCCG ACGCACCGTT CCGCATGACG CCGGAAGATC TCAACAAATG GTACGTCCGC AACAGCAGCG GCCAGATGGT GCCCTTCTCG GCCTTCGCCA CGAGCAACTG GATTTATGGC TCGCCGCGTC TTGAGCGCTA CAACGGCTTG CCGTCAATGA ACATCCAGGG CTCCCCGGCG CCTGGCGCCA GTTCCGGTGA CGCGATCAAG GCCATGGAGG CGATCGCTTC GAAACTCCCG GCCGGGATCG GTTACGAGTG GACGGGCCTC TCCGCCCAGG AACTGGAAGC GGGCAATCAG GCTCCGGCCC TCTATGCCCT GTCCATCCTG GTCGTGTTCC TGCTGCTGGC GGCCCTTTAC GAGAGCTGGA CGATCCCGCT GTCGGTGATC ATGGTCATTC CGCTTGGCAT CGTCGGCGCC CTGCTGGCGA CCACCCTGCG CGGGCTGTCC AATGACATCT ACTTCCAGGT GGGTCTGCTC ACGACCATGG GGCTGGCGGC CAAGAACGCC ATCCTGATCG TCGAGTTCGC CAAGGAAATC TACCTGCGCA CCGGCAATCT CGTCGAGGCG ACCCTGGACG CCGTCCGCAT CCGCCTACGT CCGATCATCA TGACATCGCT GGCCTTCATC TTCGGCGTGT TGCCGTTGGC GATTTCCAAC GGGGCCGGCT CGGGCAGCCA GCACGCGATT GGCACGGGCG TCATCGGCGG GATGCTGTCG GGGACCATCC TGGCAATCTT CTTCGTCCCG CTGTTCTTCG TGCTCGTCGA ACGAATCTTC AAGGCCAAGC TCCGCAAAGA CGAGGCTTCC GCCGCCCCGG TCGAGGGTCA CTAA
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Protein sequence | MSRFFIDRPI FAWVIAIVIM LAGALAIRTL PVAQYPAIAP PQVAVSAMYP GASAKTLEDS VTQVIEQKMK GIDGLDYMSS TSDSTGAATV TLTFKAGTDI DIAQVQVQNK LQTATALLPQ EVQQQGLTVA KSARNFLLVI GLYSDNPKTT SNDLTDYIAS NIQDPLSRVD GVGDVQLFGA QYAMRIWLDP NKLASYSLTP SDVSAAIRAQ NAQVSAGQLG GTPNLPGTAL NATITAQSRL QTPEEFENII LKNSQGGAIV YMRDVARVEM GAESYSAAAK YNGKPSGGLA IKLAPGANAL DTAKAVKAQV DELAKNFPSE YKYIVPYDST PFVEQSIHEV VKTLMEAIVL VFIVMFLFLQ NWRATLIPTI AVPVVLLGTF GVLAMFGYSI NTLTMFGLVL AIGLLVDDAI VVVENVERVM SEEGLSPKEA TRKSMNEITG ALIGIALVLS AVFVPMAFFG GSQGVIYRQF SITIVSAMML SVVVALVLTP ALCATMLKPI AKGHMVAETG FFGWFNRSFN DVSGRYQNSV RGILGKSVRW MAIYAAIIVA MGLLFVRLPS AFLPEEDQGF MLTLVQLPPG ATEERTLGVL DQVRSHFMEN EKEAVQSVFT VNGFSFSGPG QNAGLAFIRL KNFDERKSAD LKVPALAGRA MGKFAQIRDA MVFAIVPPAV TELGNSSGFD FQLKDIGGLG HEALVAARNQ MLGMAAQDPA LVGVRPNGQD DTPQLKIDID QAKAGAMGLT TADINAALST AWGGSYVNDF VDRGRVKKVY VQADAPFRMT PEDLNKWYVR NSSGQMVPFS AFATSNWIYG SPRLERYNGL PSMNIQGSPA PGASSGDAIK AMEAIASKLP AGIGYEWTGL SAQELEAGNQ APALYALSIL VVFLLLAALY ESWTIPLSVI MVIPLGIVGA LLATTLRGLS NDIYFQVGLL TTMGLAAKNA ILIVEFAKEI YLRTGNLVEA TLDAVRIRLR PIIMTSLAFI FGVLPLAISN GAGSGSQHAI GTGVIGGMLS GTILAIFFVP LFFVLVERIF KAKLRKDEAS AAPVEGH
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