Gene Caul_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1316 
Symbol 
ID5898771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1392394 
End bp1393287 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content70% 
IMG OID641561801 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001682944 
Protein GI167645281 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.078247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCT TCGTTCGCGA GATCGAGTTC GAGTACGGCC GCTGCGACCA GGTCTCGCCG 
CTGATCCGCC GGGTGATCGC CGACAATCCG GGTCCCTTCA CCTATGTCGG CACCGGCACC
TATATCGTCG GGCGCGGGAC GGTGGCGGTG ATCGACCCGG GTCCCGACCT GGACGGCCAT
CTGCGGGCCC TGCTGGCGGC GCTGGACGGC GAAACGGTCA GCCACATCCT GGCCACCCAC
CACCACAGCG ACCACTCTCC CCTCGCCCGC CCGCTGCGGA AGGCGACCGG GGCGACGATC
TTTGGTCGCA GGGCGCCGCA CCTGGCCCAA CTGGCGCCCG ACGTCGCGGT GGAGGCCGGC
GAGGACGAGG GCTTCCGCCC CGATGTCGAG ATCGCCGACG GCGACGTCTT CGAAGGTCCG
GGCTGGACGC TGCGGGCCGT GACCACGCCG GGCCACACCT CCAACCACGT CTGCTTCGCC
CTGAAGGAAG AAAACGCCCT GTTCAGCGGC GACCACGTCA TGGGCTGGTC GACCACGGTG
ATCACCCCGC CAGACGGCGA CATGGGCGAC TATTTCGCCA GCCTGGAGAA GGTGAAGGCC
CAGGGTTTCG ACACCCTGTG GCCGACCCAC GGCTCGCCGG TCCGCGAGGT CGAGCCGTTC
ATCCAGGCCT ATGCCGACCA TCGCCGGGCG CGCGAGGCCC AGGTGCTGGC CGCCCTGGCC
CAGGGTCCGA CCACGATCAA GGCCATGGTC CCCACGCTCT ACGCCGCCGT CGACCCGCGC
CTGCACCCGG CGGCGGCGAT GTCGGTGCTG GCGCATATGC TGTTGCTGGT GAAGGAGGGG
CGGGTGACTT GCGAGGGCGT GGCGGGACTG GACAGCGTTT ATCGGCTGAC CTGA
 
Protein sequence
MIPFVREIEF EYGRCDQVSP LIRRVIADNP GPFTYVGTGT YIVGRGTVAV IDPGPDLDGH 
LRALLAALDG ETVSHILATH HHSDHSPLAR PLRKATGATI FGRRAPHLAQ LAPDVAVEAG
EDEGFRPDVE IADGDVFEGP GWTLRAVTTP GHTSNHVCFA LKEENALFSG DHVMGWSTTV
ITPPDGDMGD YFASLEKVKA QGFDTLWPTH GSPVREVEPF IQAYADHRRA REAQVLAALA
QGPTTIKAMV PTLYAAVDPR LHPAAAMSVL AHMLLLVKEG RVTCEGVAGL DSVYRLT