Gene Caul_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1300 
Symbol 
ID5898755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1373672 
End bp1374385 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content72% 
IMG OID641561785 
Producthistidine utilization repressor 
Protein accessionYP_001682928 
Protein GI167645265 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID[TIGR02018] histidine utilization repressor, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.267444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGCGA GAACGCTGCA TCAGCGCATA CGGGACGAGA TCGAGGATCT GATCCGTTCG 
GGCGCCTGGG CGCCGGGCCG CAAGGTCCCG TCCGAGGCCG AGCTGATGGC TCGGTTCGGT
TGCTCGCGGA TGACGGTCAA CAAGGCGATG TCGACCCTGG CCGAGGCGGG GTTGATCCTC
CGCCGCCGCC GCGCCGGTTC GTTCGTGTCC CGGCCGCGCG TCCACTCCAC GGTGCTCGAC
ATTCCCGACA TCCAGGCCGA GATCCTGGCG CGGGGCGAGG CCTATCGCTT CGAGCTGTTG
GATCGCCGGC GGCGCAAGGC CAAGGCCGGC GACGCCGAGG AAAAGGCCCT GGCGGCGGGC
GGCGATCTGC TGGTGCTGCG CGGCCTGCAT GTCGGCGGCG ACCGGCCGTT CGCGCTGGAG
GACCGGCTGA TCAGCCTGAA CGCCGTGCCC GAGGCGGCCG AGCTCGACTT CGCCGACGAG
TCGCCCGGCG CCTGGCTGCT GCACCACGTG CCCTGGATCG AGGCCGAGAA CCGGATCAGC
GCCGTGGGGG CCGACGAGTC GACCGCCGAC CTGATGGCGC TCGACCCCGG CGCGGCCCTG
CTGGCGCTGG AACGTCGCAC CTGGCGGTCC GACGCGCCGG TCACCTGGGT GCGGCAGCTG
TTTCCGGGCG AGGCCTATGA CCTCGTGGCG CGGTTCGGTC GCGCGCGGGC CTAG
 
Protein sequence
MKARTLHQRI RDEIEDLIRS GAWAPGRKVP SEAELMARFG CSRMTVNKAM STLAEAGLIL 
RRRRAGSFVS RPRVHSTVLD IPDIQAEILA RGEAYRFELL DRRRRKAKAG DAEEKALAAG
GDLLVLRGLH VGGDRPFALE DRLISLNAVP EAAELDFADE SPGAWLLHHV PWIEAENRIS
AVGADESTAD LMALDPGAAL LALERRTWRS DAPVTWVRQL FPGEAYDLVA RFGRARA