| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1289 |
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| Symbol | |
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| ID | 5898744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | + |
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| Start bp | 1355602 |
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| End bp | 1358538 |
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| Gene Length | 2937 bp |
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| Protein Length | 978 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641561774 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001682917 |
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| Protein GI | 167645254 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.384181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0181603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTTC ATAATTCTCG TCGCAACGCC ATGCTCATGG GCGCGTCAGC GCTCGTCATC
TGCGGTGCTC TGCCCGCGAT CGCTCAGGCG CAAACAACCG CGCCGGCGTC GTCGGCCGAC
ACCGTCGAGG AAGTCGTCGT CACCGGCCAG CGCGCCGCCC TGCAATCGGC CCAGAAGCTG
AAGCAGAACG CCGAGCAACT GGTCGATTCG ATAACCGCCA CCGATATCGG CGCCTTGCCG
GACCGCAGCG TCACCGAAGC CCTTCAGCGT GTCGCGGGGG TCACCATCGG CCGCACGGCC
GACGGCCGCG ACGCCGACCG CATTTCGGTC GAAGGCAGCG GCGTCCAGGT TCGCGGTCTC
AGTTGGGTCC GCGGCGAAGT GAACGGCCGC GACAGCTTCT CGGCCAAGGC CGGCCGCACC
CTGAGCTTCG AGGACGTTCC GCCCGAACTG ATGTCCGGCG TCGACGTTTA CAAGAACCCT
TCGGCCGACA TCATCGAAGG CGGCGTCGGC GGCACCGTCA ACCTGCGCAC CCGCCTGCCG
TTCGACAGCG GCAAGCGCAA TCTGGCCTAT TCGGCCGACT CCAGCTGGGG CGACCTGTCC
AGGAAATGGG AGCCCAGCGG CTCGGTTCTC TACAGCAACC GGTGGGACAC CAAGATCGGC
GAGCTCGGCT TCCTGATCGA CCTGTCAGAC TCCAAGCTGA GCAGCCGCAC CGACACCATC
TCGGTCGACC CCTATTTCGC GCGCACCAAC ACCCTGGTCC CCGGCAAGAC CGTCTATGTC
CCGGGCGGTT TCGGCTATCG CAGCCTGGAC TTCGAGCGCG AACGCAAGGG CATCGCCGCC
GCCCTGCAAT GGCGCCCGAA CGAGCAATGG GACGCCAGCC TGCAGTTCCT GCGCTCGTCG
GCCTCGCAGG CCTCGACGGA GCACGCGGTC GGTTTCAATC CCGGATCGAC CAACGGGCCG
GCGACCGGCA CGGACTTCAC CTACGATTCG GACGGTCATT TCCTGAAGGG CACGCTTGCC
CAGACGCCGG GCGGCTCGAG CCTGGGATCG TCGACCATCG ACACCCGGTA CTCGGATCGT
AGCTCGGTGA CCTCCGACTA CGCCCTGAAG GTGAAATACA CTCCCAACGA CAAGTGGGCG
TTCAGCGGCG ACATCCAGTA CGTCTACGCC AAGACCAAGA CCGTCGATAA CACCGCGTTC
AACGCGCTGA ACAGCGACGC CGCGCCCGCC AGCCTGGACC TCACCGGCAG CCTGCCGGTG
ATCACCATGA ACAACGACAC GGCCTACACG TCCAACGCCG CCAACTACTA CCTGCAGGCG
GCGATGGATC ACCACGACCG CAACGAGGCG GCCCAGTGGG CCGAGCGCTT CGACGGCGAC
TACAGCTTCG ACGATGGCGG CTGGCTGAAG TCGTTCCGCT TCGGCGTTCG CCACACCTTC
CGCCAGGCGA CCACCCGCGA AACCAACTAC CGTTGGGACA CGGTGGCGCC GAGCTGGTCG
GCGACCGCTC CGATCAGCAC GCTGGACGGC TACCAAGGCT ATTACGGGCT CTACGAATTC
GACAACTACT TCCGCGGCAA GGCCCACCTG CCCGCGACCT TCGTCATGCC GAGCGCGCAG
TTCGTGAACA ACTACGGCGA CACCTCGCTG GTGCTCTCCA AGATCGCGCA GCAGAACGGC
GGCGGCTGGC GGCCCTTCAA CGGTGTCTTT GACGACCAAG GTCAGGCCGG CGGCAAGGGC
AGCATCAACC ACCAGAAGGA AGAGACCCTG GCGGCCTACG GCCTGCTGCG GTTCGGCCAT
GACGTCTCGC TGTGGGGCGA TCAGCGCGAG ATCGACGGCA ACTTCGGCCT CCGCGTCGTC
AAGACCGAAA GCCAGAGCCT GGGCATGCAG GTGTTCACCC CGAACACCAC CAGCACCGAC
ATTCCGGCCG CCGATCAGGC GTTCTCGAAC GGCGCCAAGA GCCCCTACAA GGGCGGTCGC
GACTATGTGA GCGTCCTGCC CAGCCTGAAC GTCCGCCTGA AGATCACGCC GGACATGTTC
ATCCGCTTCG CGGCGGCCAA GGCCATCGTC CGTCCGGACT TCCAGCAACT GCAGCCGAAC
TACACGATCT CGGCCACCAA CGGCTTCATC ACCGGCGGGA CCTGCTCCAG CACCATCCCG
GGCGGCTCTC AGGCCAACTG CGTCTATCAG TACACGGCCA ATGCCGGTAA TCCGGACCTG
AAGCCGACCC GTTCGACCCA GTTCGACGTG TCATACGAGT GGTACTTCAA CTCGACCGGC
AACGTGACGG CGACGGCGTT CTACAAGGAC ATCTACAACT TCGTCACCAA CGGCTCGACG
AACCTCAACT TCACCAACAA CGGCGTGACC CGCACCGTTC AGGTGGTCCA GCCGTACAAC
GCCGGCCACG GCACGATCAA AGGCTTCGAA GTCGCCTACC AGCAATATTA CGACTTCCTG
CCAGGCGTCC TGCGCGGCCT GGGGACGCAA GCCAACTTCA CCTATGTCGA CAGCAAGGGC
TCGCGCAACG CCGCGTCCAA CCCATACGAC ACCAACCAGG TCGGCAATAT CAGAACCAAT
GGGGAGGAGC TGCCGCTCGA GGGCCTGTCG AAGAAGAGCT ACAACGTCGC GGCGCTATAC
GACCTGGGCA AGGTCTCGGC GCGCCTCGCC TACAACTGGC GTGAGCGCTA CCTGCTGACC
ACCACGGCGG CGAACATCAA CATTCCGGCC TGGTACGGCT CCTACGGCCA GCTGGACGGC
TCGGTGTTCT ACACGGTCAA CGACGCGCTG AAGATCGGCT TCCAGGCGGC CAACCTCACC
AACACCCGGA CCAAGATCCT GGTCAGCTAT CCGGGCAAGC CCGAGGAAGG TTTGACGAAC
CACAACTGGG TTGTCGCCGA TCGCCGCTAC TCGATCGTGC TCCGCGGCAC GTTCTAA
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| Protein sequence | MSLHNSRRNA MLMGASALVI CGALPAIAQA QTTAPASSAD TVEEVVVTGQ RAALQSAQKL
KQNAEQLVDS ITATDIGALP DRSVTEALQR VAGVTIGRTA DGRDADRISV EGSGVQVRGL
SWVRGEVNGR DSFSAKAGRT LSFEDVPPEL MSGVDVYKNP SADIIEGGVG GTVNLRTRLP
FDSGKRNLAY SADSSWGDLS RKWEPSGSVL YSNRWDTKIG ELGFLIDLSD SKLSSRTDTI
SVDPYFARTN TLVPGKTVYV PGGFGYRSLD FERERKGIAA ALQWRPNEQW DASLQFLRSS
ASQASTEHAV GFNPGSTNGP ATGTDFTYDS DGHFLKGTLA QTPGGSSLGS STIDTRYSDR
SSVTSDYALK VKYTPNDKWA FSGDIQYVYA KTKTVDNTAF NALNSDAAPA SLDLTGSLPV
ITMNNDTAYT SNAANYYLQA AMDHHDRNEA AQWAERFDGD YSFDDGGWLK SFRFGVRHTF
RQATTRETNY RWDTVAPSWS ATAPISTLDG YQGYYGLYEF DNYFRGKAHL PATFVMPSAQ
FVNNYGDTSL VLSKIAQQNG GGWRPFNGVF DDQGQAGGKG SINHQKEETL AAYGLLRFGH
DVSLWGDQRE IDGNFGLRVV KTESQSLGMQ VFTPNTTSTD IPAADQAFSN GAKSPYKGGR
DYVSVLPSLN VRLKITPDMF IRFAAAKAIV RPDFQQLQPN YTISATNGFI TGGTCSSTIP
GGSQANCVYQ YTANAGNPDL KPTRSTQFDV SYEWYFNSTG NVTATAFYKD IYNFVTNGST
NLNFTNNGVT RTVQVVQPYN AGHGTIKGFE VAYQQYYDFL PGVLRGLGTQ ANFTYVDSKG
SRNAASNPYD TNQVGNIRTN GEELPLEGLS KKSYNVAALY DLGKVSARLA YNWRERYLLT
TTAANINIPA WYGSYGQLDG SVFYTVNDAL KIGFQAANLT NTRTKILVSY PGKPEEGLTN
HNWVVADRRY SIVLRGTF
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