Gene Caul_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1287 
Symbol 
ID5898742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1352631 
End bp1353581 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content70% 
IMG OID641561772 
Product2-dehydro-3-deoxygalactonokinase 
Protein accessionYP_001682915 
Protein GI167645252 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3734] 2-keto-3-deoxy-galactonokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0108847 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGA TGGACAGCTC GGTCACGATC TTCGGCGACT GGGGCACCTC GCGGCTGCGG 
CTCTATCTGC GCCAGGGCAA GAGCGTGCTG GACCGCCGCG ACGGGCCGGG CATCAGCGCC
CTGACGAAGT CGCCGCGCGA CACCTTCCTC GACCTGGTCG GCGACTGGCG CGAGGCGGGT
CCGTCCCTGG CCCTGCTGTG CGGCATGGTC GGGTCGCGCA ACGGCTGGAT GGAGGCGGCC
TACGCTCCCT GCCCGGCCAA CGCCGCCGAC ATCCGCGAGC GGCTGCTGCA CCTCGACGCC
GACGGCCTGC CGGTCGCCAT CGTCCCGGGG CTGTCGTGCA TCAACGCCCT GGGCGGACCC
GACGTGATGC GCGGCGAGGA GACCCAGATC CTCGGCGCCC TGTCGCTGAA TCCCGCGCTG
GCCAAGGGCC GCCACCTGCT GGCCCTGCCC GGCACCCACA CCAAGTGGGT CGTCGTCGAG
GACGGGGCGA TCACCAGCTT CCTGACCGCC CCGGTCGGCG AACTCTACGC CCTGCTGCGC
GAGCACTCGA TCCTGGCCAA GGCCGCCCCC GGCGACAGCG AATCGCCCGA GGGTCTGGCC
GCCGGGTTCG CCCGAGGCGT CGCCCGCATC GTCGAACACG GTCCCGCGCG CCTGCCGCAC
CTGATTTTCG AAACCCGCAG CCGACAATTG TTGGACGGCC TGCCCAAGGA CCAAGCCATG
GGCTTCCTGT CGGGTTTGCT GATCGCCAGT GATACCGCAA CCACCTCAAG CTGGTTTGGG
GATCTGGGCC AGGTGTCGTT GATCGGCGCC CCGGCGCTCG GCGCCCTTTA TGCCCAGGCC
ATCGCCGCCC ATGGCGGCGC AAGCGTAGCC GTCGACGGCG ATGCGGCCGT CATGGCCGGA
TTGACAACGT TGTCGTCAGC CCAGAACAGT GGAGTTCATG TCCTTGCCTA A
 
Protein sequence
MNPMDSSVTI FGDWGTSRLR LYLRQGKSVL DRRDGPGISA LTKSPRDTFL DLVGDWREAG 
PSLALLCGMV GSRNGWMEAA YAPCPANAAD IRERLLHLDA DGLPVAIVPG LSCINALGGP
DVMRGEETQI LGALSLNPAL AKGRHLLALP GTHTKWVVVE DGAITSFLTA PVGELYALLR
EHSILAKAAP GDSESPEGLA AGFARGVARI VEHGPARLPH LIFETRSRQL LDGLPKDQAM
GFLSGLLIAS DTATTSSWFG DLGQVSLIGA PALGALYAQA IAAHGGASVA VDGDAAVMAG
LTTLSSAQNS GVHVLA