Gene Caul_1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1275 
Symbol 
ID5898730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1336453 
End bp1337607 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content72% 
IMG OID641561760 
Productpeptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 
Protein accessionYP_001682903 
Protein GI167645240 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.91695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00890976 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAGATTC TGCGCCGGCT GATCTGGGTT GTGGGGGTGC TGGCCGTACT CATCGCGGCG 
TTCCTGGCCT GGGTGATGTG GCCCGGCCGT CCCGCGCCGG CCTTGCCGCC GCCCTCGGCC
TCGGCGCCGC GCGAGCCTCT CGCGTACGAG CCGCCGACCT ATCTGCCGTC GAACGACCCG
CCGTCGGGCT CGCCCTTCGT CCCCGCGCCG GCCGTTGGCG TGACGCCGGA GGACTGCCAG
GCGGGCGGGG CTTCGATCAG CGCGGCCCCG GTCAACGCCG CCTCTCTGAC CACCATGACC
TGGACGCCGT TCGGGCGCGA CGAGGTCGGC TGGGAAATCT ACGCCCCGCA CGTCGCCCAC
GAGATCCAGA CGGCCTGCGC GCCGGGCTCC AACCGCTTCG CCGCCGCGCT GGCGCGCTGG
CAGGGCGGGC ATGGCCTGAG AAGCACCGGT GTCTTTGATC CGGAAACCTT CAAGGTGATG
CTGGTGCGCT GGCACCGGGC CCGGCCGTTC GTGAAGGTCA ATGGCGAGGG GATCTGCCCC
GGCGCCCCGC CGGTCGCGAC CCTGTCGACC GCGAGGCCGG AGGAGAGCTA CGGCGGCAAG
ACCATCCAAT TGCGGCAAGG CGCGATGGAC GCCTATCGCC AGATGGTCGC CGAGGCCAAG
GCGGCGGGCG TGGTGCGCGA TCCGCGCGCG CTGACCATTT TTTCCGGCTT TCGCGAGCCA
GACGCCGACG CCGGGCGCTG CGCGCGCGAC AACAACTGCC AGGGGGTGTC ACGCACCATC
TGCTCGGCCC ACCGCACAGG GCTGGCCCTG GACATCTACA TCGCCGCCGC GCCGGGCTTT
GGCCCGGACT CCAGCGCTGA CGACAACCGC CGGGCCATGG CGCGGTCCGA CGCCTATCGC
TGGATGGTCG TCAACGCCGG GCGGTTCGGC TTCGTCAACT ACGTGTTCGA GCCCTGGCAC
TGGGAGTGGA CGGGCGAGCC GATGCTGCCG GGCGTGCCGC TCAGCAGCCT GCCGCAGGCC
GGCTCGGGCA ATCCCGGCGA CCCGCTGCTC ATTCCGCCCG CAGCACCGGC GCCGGTCGCT
GCGACAAAGC CAGGGCCGCC GCCAAAAGCC CCCCCGCCGT CGAAAGCCCC GCCGCGCCGG
CCAGCAGGAT CATGA
 
Protein sequence
MKILRRLIWV VGVLAVLIAA FLAWVMWPGR PAPALPPPSA SAPREPLAYE PPTYLPSNDP 
PSGSPFVPAP AVGVTPEDCQ AGGASISAAP VNAASLTTMT WTPFGRDEVG WEIYAPHVAH
EIQTACAPGS NRFAAALARW QGGHGLRSTG VFDPETFKVM LVRWHRARPF VKVNGEGICP
GAPPVATLST ARPEESYGGK TIQLRQGAMD AYRQMVAEAK AAGVVRDPRA LTIFSGFREP
DADAGRCARD NNCQGVSRTI CSAHRTGLAL DIYIAAAPGF GPDSSADDNR RAMARSDAYR
WMVVNAGRFG FVNYVFEPWH WEWTGEPMLP GVPLSSLPQA GSGNPGDPLL IPPAAPAPVA
ATKPGPPPKA PPPSKAPPRR PAGS