| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1268 |
|---|
| Symbol | |
|---|
| ID | 5898723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 1326969 |
|---|
| End bp | 1327982 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641561753 |
|---|
| Product | mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_001682896 |
|---|
| Protein GI | 167645233 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0161806 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00728152 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCA CCGTTTCGAT CGCCCATGTC AGCCACCGCC TCAAGGCCCC GTTCCGCATT
TCGCGCGGGG TCAAGACCGC CGCCGAGGTG GTGGTGGTCG AGGTGGTCGA GGGCGAACTG
ATCGGGCGCG GCGAGAGCGT CCCCTACGCC CGCTACGACG AGACGGTCGA TAGCGTGATC
GCCCAACTCC AGCCCGCCGC CCAGGCCTTG CGCGATGGCG CGACCCCGCA CGAGGCCCTG
GCCCTGCTGA CGGCCGGCGC GGCCCGCAAC GCCCTGGACT GCGCCCTGTG GGACCTGCGG
GCCAAGCGCG AAGGCCTGAG CGTCGAGGCC CTGACCGCCC TACGCGCGCC CGACACCCTG
GTCACCGCCG TCACCGTCAG CCTCGACACG CCCGAGGCCA TGGGCGCCGC CGCCGTGGCC
GTAGCCTCGG CCCCGCTGAT CAAGGTCAAG CTGTCGGCCG ACGACCCCGC CGCCCGCCTG
CTGGCCGTGG CCCGGGCCGC GCCGCACGCC CGGCTGATCG TCGACCCCAA CGAGGGCTGG
GACTTCGCCA CGCTCGACGG ACTCAAGCCG ATCCTGTCGG ACCTGAACAT CGCCCTGGTC
GAACAGCCCT TGCCGGCCGG CCAGGACCAG GCGCTGGAGG GCTACGATCC GCCCTATCCG
ATCTGCGCCG ACGAGTCGGT GCACACCGCC GAGGATCTGG CCGCGTTGAA GGGCCGCTAC
CGCGCCGTGA ACCTCAAGCT CGACAAGGCC GGCGGCCTCA CCGAGGCCCT GCTGATGCTG
GAGGAAGCCC GCAACCACGG CTTCGTCCTG ATGGTCGGCT GCATGGTCGC CTCGTCCCTG
GCCATCGCTC CGGCCCTGCA CCTAGCGGGA TCGTGCGCGT TCGCCGACCT CGACGGCCCG
TGGTGGCTGG CGCGGGATCA TCCGGGCGGA TGCCGGGTGG CGGACGGGCG GATGACCGCG
CCGAAGCCGG GGTTCTGGGG GGATGGCGTG ATAGCGACGG GGCTGTGGCT GTAG
|
|---|
| Protein sequence | MQRTVSIAHV SHRLKAPFRI SRGVKTAAEV VVVEVVEGEL IGRGESVPYA RYDETVDSVI
AQLQPAAQAL RDGATPHEAL ALLTAGAARN ALDCALWDLR AKREGLSVEA LTALRAPDTL
VTAVTVSLDT PEAMGAAAVA VASAPLIKVK LSADDPAARL LAVARAAPHA RLIVDPNEGW
DFATLDGLKP ILSDLNIALV EQPLPAGQDQ ALEGYDPPYP ICADESVHTA EDLAALKGRY
RAVNLKLDKA GGLTEALLML EEARNHGFVL MVGCMVASSL AIAPALHLAG SCAFADLDGP
WWLARDHPGG CRVADGRMTA PKPGFWGDGV IATGLWL
|
|---|
| |