Gene Caul_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1231 
SymbolargD 
ID5898686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1293097 
End bp1294311 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content68% 
IMG OID641561716 
Productacetylornithine transaminase protein 
Protein accessionYP_001682859 
Protein GI167645196 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR00707] acetylornithine and succinylornithine aminotransferases 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0141843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCACGT CGACGCCGTC TAACCCTTCG CAACACCACA TCATGGGCGT CTACAACCGC 
GCCCCGCTGG CGTTTGAGCG AGGCCGAGGC GCGCGCCTGT TCTCGACCGA CGGCGAAGCG
TACCTGGACT GCGTGGCGGG CATCGCCACC GACGGCCTGG GCCACGCCCA CCCCGTGCTG
GTCGAGGCGC TGAAGACCCA GGGCGAGAAG CTCTGGCACG TCTCCAACAT CTACCGCATC
CCCGAGCAGG AAGAGCTGGC CGACAAGCTG TGCGCCAACA GCTTCGCTGA CGTGGTGTTC
TTCACCAATT CGGGCACCGA GGCGATCGAG TGCGCCCTGA AGACCGCCCG CAAGTATCAC
ACCGCCAATG GCCAGCCGGA GCGCGTGGAG ATCTACGGCT TCGACGGTTC GTTCCACGGC
CGCTCCTACG CCGCCGTCAA CGCCGCGGGC AATCCCAGCT ATGTCGAGGG TTTCGGCCCG
CGCCTGCCGG GCTACACCCA GCTGACCTTC GGCGACATCG ACGCGATCAA GGCCGCCTGC
GCCTCGCCGA CCACGGCGGC GATCATCATC GAGCCGGTGC AGGGCGAGGG CGGCGCGCGC
GCCGTGACCG AGGCCCAGCT GGACGAACTG CGCCAGCTGA CCCGCGATAA CGGCGTGCTG
CTGATCTATG ACGAGGTCCA GTGCGGCATG GGCCGGACCG GAAAGCTGTT CGCCTACGAG
TGGGCCAGCG ACGCCGCGCC GGACATCATG TGCATCGCCA AGGCCCTGGG CGGCGGCTTC
CCGGTCGGCG CCTGTCTGGC CACGGCGGAA GCGGCCAAGG GCATGACCGT GGGCGTTCAC
GGCTCGACCT TCGGCGGCAA CCCGCTGGCC ATGGCCGTGG GCAAGGCGGC CCTCGACACG
ATCAACACGC CCGAGATCCT CGACAACGTG AAGACCGTGG CCGGCTACTT CACCCAGCAA
CTGAACGGCC TGAAGGACCG CTTCCCGGAC GTCATCGTCG ACATCCGCGG CAAGGGCCTG
CTGATCGGCA TCAAGCTGAT CCCGAACAAT CGCGAGTTCA TGGTCCTGGC CCGCGACCAG
TATCTGCTGG TGGCCGGGGG GGGTGACAAC TGCGTGCGCC TGCTGCCGCC GCTGAACCTC
ACCGTCGAGG AGGCTTCCGA GGCCATCGCC AAGCTGGAAA AAGCTTGCGA GGCTGCTCGG
GCCAAGGCGG CCTGA
 
Protein sequence
MSTSTPSNPS QHHIMGVYNR APLAFERGRG ARLFSTDGEA YLDCVAGIAT DGLGHAHPVL 
VEALKTQGEK LWHVSNIYRI PEQEELADKL CANSFADVVF FTNSGTEAIE CALKTARKYH
TANGQPERVE IYGFDGSFHG RSYAAVNAAG NPSYVEGFGP RLPGYTQLTF GDIDAIKAAC
ASPTTAAIII EPVQGEGGAR AVTEAQLDEL RQLTRDNGVL LIYDEVQCGM GRTGKLFAYE
WASDAAPDIM CIAKALGGGF PVGACLATAE AAKGMTVGVH GSTFGGNPLA MAVGKAALDT
INTPEILDNV KTVAGYFTQQ LNGLKDRFPD VIVDIRGKGL LIGIKLIPNN REFMVLARDQ
YLLVAGGGDN CVRLLPPLNL TVEEASEAIA KLEKACEAAR AKAA