| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1180 |
|---|
| Symbol | |
|---|
| ID | 5898635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 1241264 |
|---|
| End bp | 1242889 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641561663 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001682808 |
|---|
| Protein GI | 167645145 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2509] Uncharacterized FAD-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.068758 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.846723 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCC TCTCGAACCT GACGCTGCCG CTAGGCCATC CGCCGGAAGA TCTGCCCCCG
GCCATTTGCA CACGCCTGGG CGTCCCCGCC GAAGACCTGA TCAGCCACAC CGTCGCCCGC
CGCGCCCATG ACGCGCGGAA GAAGGCGGCG ATCCTGATGG TCTATACGGT GGACGTGGCC
CTGCGCGACG AGGCCGCCGT GTTGGCGCGG TTCGCGTCCG ACAGCCAGGT GCGGCAGACG
CCCGACACCG CCTATCGCCT CGTCGCCCAG GCGCCCAAGG ACTTCCAGCG CCCCGTCGTC
ATCGGCGCCG GCCCCTGCGG CTTGTTCGCC GGGCTAATCC TGGCCCAGAT GGGCTTTCGG
CCGATCATTC TGGACCGGGG CAAGGTGGTG CGCGAGCGGA CCAAGGACAC CTGGGGCCTG
TGGCGGCGCG GCGAGCTGAA CCCGGAGTCC AACGTCCAGT TCGGCGAGGG CGGCGCCGGC
ACCTTCTCGG ACGGCAAGCT CTACAGCCAG GTCAAGGACC CCCGCCACCT GGGCCGCAAG
GTTCTGGAGG AGTTCGTCAA GGCCGGCGCC CCCGAGGAGA TCCTGACCGA GGCCCATCCG
CACATCGGCA CCTTCCGCCT GGTGACGATG GTGGAGCGCA TGCGCGAGAC CATCGAGGCT
CTGGGCGGCG AATATCGCTG GGAGCAGCGG GTCGACGGGA TCGACGTCGA GACCGCCGCC
GACGGCTCGC GCAAGATCAA GGGCCTGCAC CTGTCCACCG GCGACTATCT GGCCGCCGAC
CACGTGGTGC TGGCCGTCGG TCACAGCGCC CGCGACACCT TCCAGAGGCT GCACGACCAG
GGCGTCCACA TCGAGGCCAA GCCGTTCTCG ATCGGCGTGC GGATCGAACA TCCGCAGTCG
TGGATGGACA AGGCCCGCTT CGGGGCCTGC GCCGGCCACC CGGACCTGGG CGCCGCAGAC
TACAGTCTGG CCCACCACTG CAAGAACGGC CGCACGGTCT ACAGCTTCTG CATGTGCCCG
GGCGGTACGG TGGTGGCGGC GACCTCCGAG CCCGAGCGCG TCGTGACCAA CGGCATGAGC
CAGTATTCGC GCAACGAGCG CAACGCCAAT TCCGGCTTCG TGGTCGGCAT CGACCCGGAG
CGCGACTATC CAGGCCATCC ACTGGCCGGC ATCGCGTTCC AGCGCAAATG GGAGAGCCTG
GCCTACACCG CCGGGGGCTC GACCTATGCC GCTCCGGCCC AGAAGGTCGG CGATTTCCTG
GCCGGGAAGC CGTCGGAAGC GCTCGGCGAG GTGCAGCCGT CCTACAAGCC GGGCGTCAAG
ATGACCGACC TGGCCCAGTG CCTGCCGCCG TTCGTGATCG ACGCCATGCG CGAGGCTCTG
CCGGTGTTCG GCCGCCAGAT CGCCGGCTAC GATCATCCCG ACGTGCTGCT GACGGGCGTG
GAGACCCGCA CCTCCTCGCC GATCCGCATC ACCCGCGGCA AGGACTTCCA GAGCCTCAAC
ACCGCCGGCC TGTTCCCGGC CGGCGAGGGC GCGGGCTATG CCGGCGGCAT CCTCTCGGCG
GCGATCGACG GCATCAAGGT CGCCGAGGCG GTGGCGGCGG CCTATGCGGG TGAAGTCGGA
GGCTGA
|
|---|
| Protein sequence | MLRLSNLTLP LGHPPEDLPP AICTRLGVPA EDLISHTVAR RAHDARKKAA ILMVYTVDVA
LRDEAAVLAR FASDSQVRQT PDTAYRLVAQ APKDFQRPVV IGAGPCGLFA GLILAQMGFR
PIILDRGKVV RERTKDTWGL WRRGELNPES NVQFGEGGAG TFSDGKLYSQ VKDPRHLGRK
VLEEFVKAGA PEEILTEAHP HIGTFRLVTM VERMRETIEA LGGEYRWEQR VDGIDVETAA
DGSRKIKGLH LSTGDYLAAD HVVLAVGHSA RDTFQRLHDQ GVHIEAKPFS IGVRIEHPQS
WMDKARFGAC AGHPDLGAAD YSLAHHCKNG RTVYSFCMCP GGTVVAATSE PERVVTNGMS
QYSRNERNAN SGFVVGIDPE RDYPGHPLAG IAFQRKWESL AYTAGGSTYA APAQKVGDFL
AGKPSEALGE VQPSYKPGVK MTDLAQCLPP FVIDAMREAL PVFGRQIAGY DHPDVLLTGV
ETRTSSPIRI TRGKDFQSLN TAGLFPAGEG AGYAGGILSA AIDGIKVAEA VAAAYAGEVG
G
|
|---|
| |