Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1136 |
Symbol | |
ID | 5898591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 1204250 |
End bp | 1206547 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641561618 |
Product | TonB-dependent receptor |
Protein accession | YP_001682764 |
Protein GI | 167645101 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.438205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000214411 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCAGAC ACAGGAACTA TCGCCTGCTG GCCGGCGGAT TGCTGAGCGT CAGCGCCGCC GCCCTGCAGG GGATCACGCC CGCTCAGGCT CAGGCTCAGG CCCAGACTCA GGCCCAGCCA GCGAGCGTTC AGATCGAGGA AGTCGTGGTC ACCGCCCGCC GTCGCGAGGA ACGGTTGCAG GACGCGCCGG TGGCCGTAAC CGCCCTATCC GGCGACGCCC TGCAGGCCCG CGGGGTCGAG AGCGTCGACC AGATCGCCAG GTTCGCCCCC AGCATCCGCT TCGACGGCGC CGCGGCGCTG AGCGGCGGCA ACTACAACGC CACCGTCTTT ATCCGCGGCG TCGGCCAGAA CGACTTCGCG ATCTTCAGCG ACCCCGGCGT GGGCGTCTAT GTCGACGGCG TCTATTACGC CCGCTCGATC GGCGGCACGA TGGACGCCTT CGACGTCAGC CGCATCGAGG TCCTGCGCGG CCCGCAAGGA ACGCTGTTTG GCAAGAACAC CATCGGCGGC GCGGTGGTGA TCTCCACCGC CCAGCCCGGC GATGCGTTCG GCGGCCAGAT CGAGGGCACG GTCGGCAGTC TGAACCGGCG CGACCTCAAG GGCCATGTCG ACATCCCGCT GAGCGACAAG GCGGCCGTGC GCCTGTCGGC CGCCCGCCTG ACGCGCGACG GTTACGGCAA GCGACTGCTG ACCGGCGAGG ACCTGGGCGA CCGCAACGCC ACGGCGGCGC GGGCGCAACT GCGCTGGGAA GCCTCCGACG CGGTGATCGT CGAGCTGTCG GCTGACTACA CCCGAGCCCG CGAACACTCG GCCCCTCAGA AGCTGCTGGT GATCGGGGCC GTCCCCGGCT TTGCCGTCGG GCCGTTCATG GGCAACTTCA ACACCTATAT CGCCCCTGGC CTGGGGATCA CCGCGCCCAA CGGCGCCAAG ACCCTCAACA CCTCGTTTCT GACCGACGAC CCGTACACGA CCTACGGCAC CGGCCCCAAT GTCAACGACC TGGACCTCTG GGGAACCTCG GCGACCGTGA ACTGGGACCT GGGGGGCGTC ACCTTCAAGA GCATCAGCGC CGTTCGCGGC CTGAAGGCCA CGTTCGCCCG CGACGGCGAC AACACGCCCT TCACCTTCCG CGAGACCTTC AACCACGACG TCCAGGCCCA ATACAGCCAG GAGTTCCAGT TCAGCGGCCA GTCGTTCGAC GACAGGCTGA CCTGGGTGAC CGGCGCCTAT GTATTCCAGG AGCGCGGCAC CGATTCCGGC TACGCCAAGC TGGCCCTGGG CCTGGCCCCA GGCGCCTCGC CGCCGCCCTA CAGCCCGTCG GCGGCGGTCT ATACCAAGGT GACCAGCACC ACCTACGCCC TGTTCGCCCA GGGCAGCTAC AGCCTGACCG ACCGGCTCAG CGCCACGGTC GGGGCGCGGG TCAATCGCGA TGACAAGGAC TATGTCCTCG ACCACCGCCG CATCCGTGAC GGCGGGATCA TCGCCCAGCT CAGCCGGGGC GGCTCGTGGG ACTCGTTCAC CCCCAAGCTG GGTCTGGAAT TCAAGGCCAC GCCCGACGTG CTGCTCTATG TCTCGGCAGG CAAGGGCTTC AAGAGCGGCG GCTTCAACGC CCGACCGCTC AACGACGCCA CGGAAGTCAC CGAATACCAG CCCGAGACCC TGCTGACCTA CGAACTGGGC GCGAAGACCG CCTGGTTCAA TCGTCGGCTG ATCCTCAATC TGGCCGGCTA TTTCAGCGAC TACCAGGACA TCCAGGTCAC GGTGAACCAG ACGCCGCGCA ACTTCGTGGC CAACGCCGCG GCGGGCGAGG TCAAGGGCGT CGAACTGGAG CTTCAGGCCC GGCCGACGGC CAACTGGAGC TTCAATCTGG GCGCCGGCTA CATGGACGCC AAGTACACCA AGGTGGGTTC GGGCCTGGCC GCCGGCCAAG TGCTGCCGAT CACCCTGGCC ACCCACTTCG TCAAGGCCCC GGAATGGACG GCCAACGGCG GGATCGAATA TTCCCGCGAA CTGTCGGTGG GCGGTCGCCT GCTCGCCCGC GTCGACTGGA CCCACTACAG TACGGTCTAT AACGACGTGG CCAATGATCC GGACCTGACC CAGCCGGCCT ATGACCTGTT CGGCGCCAGG ATCGCCTATA CCTCGGCCAA TCAGCTGTGG CAGGCGGCGC TGTTCGGCTC CAACCTGTCG GACGAGCGCT ACAAGGTCTC GGGCAACGCC TCCAGCGGCT TTGGCCTGAA GGAGGCCAGC TACGGCCGGC CGCGTGAATG GGGCTTGAGC GTCAACCGAA AATTCTAG
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Protein sequence | MSRHRNYRLL AGGLLSVSAA ALQGITPAQA QAQAQTQAQP ASVQIEEVVV TARRREERLQ DAPVAVTALS GDALQARGVE SVDQIARFAP SIRFDGAAAL SGGNYNATVF IRGVGQNDFA IFSDPGVGVY VDGVYYARSI GGTMDAFDVS RIEVLRGPQG TLFGKNTIGG AVVISTAQPG DAFGGQIEGT VGSLNRRDLK GHVDIPLSDK AAVRLSAARL TRDGYGKRLL TGEDLGDRNA TAARAQLRWE ASDAVIVELS ADYTRAREHS APQKLLVIGA VPGFAVGPFM GNFNTYIAPG LGITAPNGAK TLNTSFLTDD PYTTYGTGPN VNDLDLWGTS ATVNWDLGGV TFKSISAVRG LKATFARDGD NTPFTFRETF NHDVQAQYSQ EFQFSGQSFD DRLTWVTGAY VFQERGTDSG YAKLALGLAP GASPPPYSPS AAVYTKVTST TYALFAQGSY SLTDRLSATV GARVNRDDKD YVLDHRRIRD GGIIAQLSRG GSWDSFTPKL GLEFKATPDV LLYVSAGKGF KSGGFNARPL NDATEVTEYQ PETLLTYELG AKTAWFNRRL ILNLAGYFSD YQDIQVTVNQ TPRNFVANAA AGEVKGVELE LQARPTANWS FNLGAGYMDA KYTKVGSGLA AGQVLPITLA THFVKAPEWT ANGGIEYSRE LSVGGRLLAR VDWTHYSTVY NDVANDPDLT QPAYDLFGAR IAYTSANQLW QAALFGSNLS DERYKVSGNA SSGFGLKEAS YGRPREWGLS VNRKF
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