Gene Caul_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1130 
Symbol 
ID5898585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1196651 
End bp1198150 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content70% 
IMG OID641561612 
ProductN-acyl-D-glutamate deacylase 
Protein accessionYP_001682758 
Protein GI167645095 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3653] N-acyl-D-aspartate/D-glutamate deacylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000145932 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCCTGG CGTCCACGGC GCTGGCTTCC ACCCTGATCG TGGGCGCCAA GGTGGTGGAC 
GGCTCCGGCG GACCGGCGCG CTCTGTTAGT GTCAGGATCG ATGGCGAACG CATCGCCGGC
GTCGGCGTCC TGACGCCCAC GCCGGGCGAA AGGGTGATCG ACGCCAGGGG CTTGGTCCTG
GCGCCCGGCT TCATCGACGC TCACAGCCAT CACGACCGCG AGGCCGACAA GACGCCGGAC
CTGACCGCGG TCACCGCCCA GGGCGTGACG ACCATCGTCG TGGGCCAGGA TGGCGAATCC
AGCTTTCCGC TGAAGACCTA TTTCGAGGGT CTGGCCAAGG CGCCCCTGGC GGTCAATGTC
GCCTCCTACA CCGGCCACGG CACGCTGCGC GGGCGGGCCA TGGGGACCGA CTACAAGCGC
CCCGCCACAC CGGACGAGAT CGCCGCCATG CAGGCCGAAC TCACCGCCGA CCTGGCCGAA
GGCTCGCTGG GCCTGTCCAC CGGGTTGGAA TACGACCCAG GCATCTACGG GACCAAGGCC
GAGGTCATGG CCCTGGCCAA GACGACGTCC GCGGGGCGCG GCCGCTATAT CAGCCACCTG
CGCAGCGAGG ACGTGAAGCT GGACGAGGCC ATCGACGAGA TCATCGCGAT CGGCCGCGAG
GCCAGGCTGC CGGTGGAGAT TTCCCACCTC AAGATCGCGA TCGTCGACCG CTGGGGGCAG
GCGGGGCAGA TTCTGGCCAA GCTGGATGCG GCCCGCGCGC AGGGCGTGGA CATCACCGCC
GACGTCTATC CGTATGAGTA TTGGCAGAGC AACCTGGCGG TGCTGCTGCC CGAGCGGAAT
TTCGAGGACC TGGCCGCCGC GCGGTTCGCC CTGACCAAGC TGACGACGCC CGCGGGCCTG
CGCCTGGCGG TGTTCGCGCC CGACCCTTCG CTGGTCGGCA AGACCGTCGC CGACATCGCG
GCCGACCGTC GCGCCGATCC GGCGGAGACC TACCTGGCGC TGACCCGGCA ATCGGAGGCC
TTCCATCTGG CGCATCCCGA GGTCGAGCGC GTGGACGCGG TGATCGGCAC GGCCATGACC
GGCGCCGACA TCGACGCCTT CATCGGCTGG GACCATTCGG TGATCTGTTC GGACGGCATG
TCGCACGGCC TGCACCCCCG TGGCTTCGGG GCCTTCGCCA AGATCCTGCG GGTCTATGTG
CGCGAGAAGC GGACGCTGTC CCTGGAGCAG GCCGTGCGCA AGATGAGCGC CCAGACCGCC
GACCAACTGG GGATCGCCGA GCGTGGCGCG ATCAAGCCGG GCAATTTCGC CGATCTGGTC
CTGTTCGACG CCGCGACCAT CGCGGACCGT TCGGATGTCT CACACCCCAA CGCCCTGGCC
ACGGGCGTGG CGCGGGTTTG GGTCAATGGC GCGGTGGTCT TCGAGACTGG CCGCGCCACG
GGCGCCCGAC CCGGGCGCGT CGTGCGCAGA GGCGGCTCGG ACAGCGCGCC AAGGCGCTAG
 
Protein sequence
MLLASTALAS TLIVGAKVVD GSGGPARSVS VRIDGERIAG VGVLTPTPGE RVIDARGLVL 
APGFIDAHSH HDREADKTPD LTAVTAQGVT TIVVGQDGES SFPLKTYFEG LAKAPLAVNV
ASYTGHGTLR GRAMGTDYKR PATPDEIAAM QAELTADLAE GSLGLSTGLE YDPGIYGTKA
EVMALAKTTS AGRGRYISHL RSEDVKLDEA IDEIIAIGRE ARLPVEISHL KIAIVDRWGQ
AGQILAKLDA ARAQGVDITA DVYPYEYWQS NLAVLLPERN FEDLAAARFA LTKLTTPAGL
RLAVFAPDPS LVGKTVADIA ADRRADPAET YLALTRQSEA FHLAHPEVER VDAVIGTAMT
GADIDAFIGW DHSVICSDGM SHGLHPRGFG AFAKILRVYV REKRTLSLEQ AVRKMSAQTA
DQLGIAERGA IKPGNFADLV LFDAATIADR SDVSHPNALA TGVARVWVNG AVVFETGRAT
GARPGRVVRR GGSDSAPRR