Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1078 |
Symbol | |
ID | 5898533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 1137964 |
End bp | 1140147 |
Gene Length | 2184 bp |
Protein Length | 727 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641561560 |
Product | 1A family penicillin-binding protein |
Protein accession | YP_001682706 |
Protein GI | 167645043 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.319269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGATC CCGCCGACGG TCCCGAGAAC GCCGAGCCGG AGGCCTCGCC CGAGACCGAG GCCGCCCTGT CGAAACCGAA GAGGGTCAGG AAGCCGCGCC CGAAGACCGC GGCGGCGCCG GAGCCGAAGC CCAGCGACCT CGCCGACGGC GACGCCGGAC TGGAAGCGCC GAGCCCCGAG CCGTCCGCCG AGGCCGAGAT CGAAGCCGTC GAGGCCGAGG TCGTCGCCGA CGCCACGCCC CCCGCCCCGC CCGGCGTCCC GTTCTGGAAG CAGAAGCTGT GGAAGCAGCG CCCCTGGCAG ATCGGGGCCG CCGCCGTGGT CCTGGCGATC GTCGCGGTGA TCGGCTGGCT GCTGTGGTCC CTGCCCCTGG GCCGCGCCCT GGAGCCGGTG GCCAATCCGG CGCTGGTGCT GGTGGCCACC GACGGCTCGC CCATCGCCCG GCGCGGCTCG TACAAGGAAG CGCCGATCGA GGTGGCCAAG CTGCCGGCCT ATGTACCAGG GGCGTTCATC TCCATCGAGG ACCGGCGGTT CTACACGCAC TGGGGCGTCG ACCCCAAGGC CATCGCCCGC GCCATGAACG CCAACCGCAA GGCCGGCGGA GTGTCGGAGG GCGGATCGAC CATCACCCAG CAACTGGCCA AGAACGCCTT CCTCAACAGC GACCGCAACC TGCGCCGCAA GGCCCAGGAG GCGCTGATCG CCCTCTATCT GGAGGCGCGG CTGAGCAAGG ACGAGATCCT GTCGCGCTAC CTGTCGTCGG TCTATTTCGG CGAGGGGGCG TTCGGACTGC GCGCCGCGGC CCGGCACTAT TTCGACAAGA CGCCAGAGAC CCTGAGCATC GGCGAGGCCG CCATGCTGGC CGGGATGGTC AAGGCCCCCT CCCGCCTGGC CCCCACCGAG AACTTCGAGG GCGCGCGCGA GCGGATGCTG ACGGTGCTGG ACACCATGGT CGAGACCGGG GTGATCACCC AGGCCCAGGC CCGCCAGGCG GCGCGCGACA TGCATCCCCA GCCGGCGCGC GAAAAGCTGC CGACCGGGTC GTATTTCGCC GACTGGGTGT TCCCCCAGGC CCGCGCCGCC CTCGAGCGCG GCTTTGGCGA GACGATCGTC AAGACCACGC TGGACACCCG CCTGCAGGCC CAGGCCGAGA AGATCCTGAG CCGCGCCCTG GAGCGTGACG GCCAGGCCCT GCACGCCACC CAGGGGGCGA TCGTGGCCAT GCGCACCGAC GGCCGCGTCG TGGCCATGGT CGGCGGCCGC GACTACAAGA CCAGCCAGTT CAACCGCGCC GACGGCGAGC GCCAGCCGGG CAGCGCCTTC AAGCTGTTCG TCTATCTGGC GGCCATGCGC CAGGGCATGA CCCCGACCAC CCCGATCCTC GACGCGCCCA TCGACATCAG CGGCTACAGC CCCAAGAACC ACGAGGGCAA GTACGCGGGG CGCGAGGTTC CGCTGATCAC CGCCTTCGCC GCCTCGTCCA ACGTGGCCGC CGTGCGCCTG GCCAAGCAGG TCGGCCGCGA CGCCATCGTC AAGACCGCCC GTGATCTGGG CGTCACCGAG CCGATCCCCC AGGACCTGAC CCTGGCCCTG GGCACCGGCC CGATGAGCCT GGTGCAACTG ACCGCCGCCT ACGCCGCCAT CGCCGCCGGC GAGGCCCCGG TCGTGCCGCA CGGCCTGGCC GACTGGCGCA AGCCCGCCCG GGTGCACAAG CTGTCCAAGG CCGAGCTGGC CAGCATGCGC GACCTGCTGC GTTCGGCCGT GCATCGCGGC ACCGGCCTCG AGGCCGCCAT CCCCGGCGCG TTCGGCAAGA CCGGCACCAC TCAAGGCTAC CGAGACGCCC TGTTCGTCGG CTATGTCGGC GACCTGGTGA TCGGCGTCTG GGTCGGCAAC GACGACAACA GCGCCATGAA CGGCGTGGTC GGCGGCGGCC TGCCGGCCAA GATCTGGAAG GCGTTCGCCA CCTACGCCAC GATCGGCGAC CGCCCCGCCG CCCCAGAGGA TGACGCGACC ACCGCCGCCG AGGACCCGTT CCTGGGCGAT GACCTGCTGG GTCCGGCCGA GGTCCCGGTC GAACCCGTCC CGGCGCCGGA AGGCGAACCC GTCGATCCCG CCGCTCCGGT TCCACCAGCG GCGCCCGTGG TCGCCGCACC AGCGGCGGAA GCTCCGCGCG CGCCGGGGCA GTAA
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Protein sequence | MSDPADGPEN AEPEASPETE AALSKPKRVR KPRPKTAAAP EPKPSDLADG DAGLEAPSPE PSAEAEIEAV EAEVVADATP PAPPGVPFWK QKLWKQRPWQ IGAAAVVLAI VAVIGWLLWS LPLGRALEPV ANPALVLVAT DGSPIARRGS YKEAPIEVAK LPAYVPGAFI SIEDRRFYTH WGVDPKAIAR AMNANRKAGG VSEGGSTITQ QLAKNAFLNS DRNLRRKAQE ALIALYLEAR LSKDEILSRY LSSVYFGEGA FGLRAAARHY FDKTPETLSI GEAAMLAGMV KAPSRLAPTE NFEGARERML TVLDTMVETG VITQAQARQA ARDMHPQPAR EKLPTGSYFA DWVFPQARAA LERGFGETIV KTTLDTRLQA QAEKILSRAL ERDGQALHAT QGAIVAMRTD GRVVAMVGGR DYKTSQFNRA DGERQPGSAF KLFVYLAAMR QGMTPTTPIL DAPIDISGYS PKNHEGKYAG REVPLITAFA ASSNVAAVRL AKQVGRDAIV KTARDLGVTE PIPQDLTLAL GTGPMSLVQL TAAYAAIAAG EAPVVPHGLA DWRKPARVHK LSKAELASMR DLLRSAVHRG TGLEAAIPGA FGKTGTTQGY RDALFVGYVG DLVIGVWVGN DDNSAMNGVV GGGLPAKIWK AFATYATIGD RPAAPEDDAT TAAEDPFLGD DLLGPAEVPV EPVPAPEGEP VDPAAPVPPA APVVAAPAAE APRAPGQ
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