Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1052 |
Symbol | |
ID | 5898507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 1111189 |
End bp | 1111836 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641561534 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001682680 |
Protein GI | 167645017 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.857726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTTTG TATCCCTGAA TATCGAGGCG CCCACCGACG CCCCCGTCAA GCTGACGCGC CGGGCCCTGG CCAAGCAGCG CACGCGTGAA CGCGTCCTGT CGGCCGCCCG CCGGCTCTTC ATCGAGCGTG GCTACGAAGG CGCGACCATC CGCGACATCG CCCAGGCCGC CGGCATGTCG ACGGGCGCTG TGTTCGCCAG CTTCTCCGAC AAGAACGAGC TGTTCGACGA GATCCTGACG GCCGACTACG AAGTCATCTA CGCCCAGATG AAGCTGGCCA GCACGACCGC GACCACCGTG GAAGAAGGCG TGATCGGCAT GTTCGCCGTC GCCTACGGCT TCCACGTCGA TCAACTGCCG CTGCTGCAGG CCAGCATCGC CGTGTCGTGG ACCCGTTCGG AAACCGCCGA GCGCCGCAAC CGCGGCCACC TCAAGCACAT CTTCAACCTG CTGAACGGCG TGCTGACGCG CGGCGTCGAG CGCGGTGAAC TGAAATCCTC CGCCGACGTT AAGCTGCTCG CGGAGATCAT CTGGGACGTG TATGTCGCCA ACTATCGCCG GGCGATTTTT GACGCCTGGA CGGTCGAAGC CCTGCTGTCG CGACTTTCAG ATCAACTGAA GGTCATTCTG GCGGGCGCAC GCGCTTAA
|
Protein sequence | MSFVSLNIEA PTDAPVKLTR RALAKQRTRE RVLSAARRLF IERGYEGATI RDIAQAAGMS TGAVFASFSD KNELFDEILT ADYEVIYAQM KLASTTATTV EEGVIGMFAV AYGFHVDQLP LLQASIAVSW TRSETAERRN RGHLKHIFNL LNGVLTRGVE RGELKSSADV KLLAEIIWDV YVANYRRAIF DAWTVEALLS RLSDQLKVIL AGARA
|
| |