| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1012 |
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| Symbol | fliF |
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| ID | 5898467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | + |
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| Start bp | 1071994 |
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| End bp | 1073637 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641561494 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001682640 |
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| Protein GI | 167644977 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.357656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.896317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATAAGT TCCTCAGCGC GATTCAAAGG TTCGGTGTCG GCCGTCTGGC CGCCCTGATC
GGCGTCGCCG CTGGCGCGAT CGCCGTGATC GCCGCCGTGA TGATGATGAT GAGCAAGCAG
CCCAACGAGC TGCTGCTGTC CAATGTCGAC CCCAAGGAAT CCGCGGCGGC GACCCAGGCG
CTCGACACCG CCGGCATCAA GTACGAGACC AAGAGCGACG GTTCGACGAT CTATGTCGCC
CGCGACAAGG TCAACGCCGC CCGCCAGTTG ATCTTCACCA AGGGCCTGGT GACCTCCGGC
TCGGTCGGCT ACGAGATCTT CGACACCGGC AGCGCCCTGG GTCAGACCGA CTTCGTCCAG
CAGCTGAACC GCCAGCGCGC CCTCCAGGGC GAGCTGGAGC GCACGATCCA GGGCTGGGAC
GGCGTCCGCG CCGCCCGCGT CCACCTGGTC ATGCCCAAGC GCCAATTGTT CGAGGAGGAC
GCCGAGCAGC CGACCGCCGC CGTCACCGTC AGCATGGCGC GCGAGCCTTC GCCCGACATG
GTCCGCGCCG TCCAGAACCT GGTGGCCGGC TCGGTGGCCG GCATGAAGCC CGACCGGGTC
AACGTCATCG ACCAGCATGG CAAGACCCTG TCGGCCGGCA ACGACGAGAG CCTGGCCGGC
AAGATGGCCC AGGACGCCAA GAGCGCGACC GAGGCCCGCA TCGCCAAGAC GGTCAAGGAC
ATGATCGACG GCGTGCTCGG CCCGGGCAAG GCCCGCGTCA ACGTCACCGC CGACCTCGAC
CTGAACCGCG TCACCACCCA GGAGCGCAAG TTCGATCCGG ACGGCCAGGT GATCCGCTCG
GAGAGCACCA ACGCGGCCAA CAACAGCGAG ACCAAGAACG ACGACACCGG CGGCGTCACC
TCGACCCAGA ACATCCCGGG CCAGACGCCC AACGGCTTCC AGCCGCTGGG CAGCAAGTCG
GACAGCAACG AAAGCGTCAC CAACTACGAG ATCTCGGAAA GCACCAAGAC CACGGTCCAG
GAGCCGGGCG CGGTCCGCAA GGTCGCCGTG GCCGTGGCCA TCGACGGCGT CGCCGCCCCT
CCCGGCAAGG ACGGCAAGCC CGGCGCCTAC ACGCCCCGCA GCGCCGAGGA GATCGCGCAG
ATCGAGCAGT TGGTGAAGAC CGCGGTCGGC TTCGACCAGA CCCGCGGCGA CCAGGTCTCG
GTGGTCAATG TCCGCTTCCC GCAACCCGAG GACCAGGGCC TGGGCAAGGC GGGCCTGCTG
GCCGGCTTCG ACAAGAACGA CATCATGCGC TTCATCGAGC TGGGCGTTCT GGCCGTCGTG
GCCCTGCTGA TCCTGTTGTT CGCGGTCCGC CCGTTCCTGA AGAGCCTGAT GACCCCGCCG
ACCCCGTTGG GCCTGGCGTT GAACGGGCCG CAGGTGACCC GCATGGTCAC CCTGTCGGAC
GGCTCGACCC AGGAGGTCAT CGTCGACCAG TCCGGCGCCT CTATGGCCCT GGCCGCCCCC
AGCGACATGG ACCAGCGCAT CGACATCGCC AAGATCGAGG GCCAGGTGAA GGCCTCGTCC
GTCAAGCGCG TGGCCGAGTT CGTCGAGAAG CATCCTGACG AATCGGTGGC GATCCTTCGC
ACCTGGCTGC ACGAGTCCGA GTGA
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| Protein sequence | MDKFLSAIQR FGVGRLAALI GVAAGAIAVI AAVMMMMSKQ PNELLLSNVD PKESAAATQA
LDTAGIKYET KSDGSTIYVA RDKVNAARQL IFTKGLVTSG SVGYEIFDTG SALGQTDFVQ
QLNRQRALQG ELERTIQGWD GVRAARVHLV MPKRQLFEED AEQPTAAVTV SMAREPSPDM
VRAVQNLVAG SVAGMKPDRV NVIDQHGKTL SAGNDESLAG KMAQDAKSAT EARIAKTVKD
MIDGVLGPGK ARVNVTADLD LNRVTTQERK FDPDGQVIRS ESTNAANNSE TKNDDTGGVT
STQNIPGQTP NGFQPLGSKS DSNESVTNYE ISESTKTTVQ EPGAVRKVAV AVAIDGVAAP
PGKDGKPGAY TPRSAEEIAQ IEQLVKTAVG FDQTRGDQVS VVNVRFPQPE DQGLGKAGLL
AGFDKNDIMR FIELGVLAVV ALLILLFAVR PFLKSLMTPP TPLGLALNGP QVTRMVTLSD
GSTQEVIVDQ SGASMALAAP SDMDQRIDIA KIEGQVKASS VKRVAEFVEK HPDESVAILR
TWLHESE
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