| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1005 |
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| Symbol | mnmA |
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| ID | 5898460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | - |
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| Start bp | 1062386 |
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| End bp | 1063615 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641561487 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001682633 |
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| Protein GI | 167644970 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.32546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.41477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGA TGGACGCCGA CATCGCCCCC TTCGACACCG CCAGGACCGA CCACGGCCTC
ATGGACCGCG CCGTCGAGCA GGCGCGCGCG GCCGTCGGCC TGCCGGTCGG GACGCGGATC
GTCGCGGCGA TGTCCGGCGG CGTGGACTCC ACCGTCACCG CCGCCCTGCT GGCCAAGGCC
GGCTACGACG TGGTGGGCGT CACCCTGCAG CTCTACGACC ACGGCGCGGC GATCACCAAG
AAGGGCGCCT GCTGCGCCGG CCAGGACATC CTGGACGCCC GGATGGCCGC CGAGCGGATC
GGCATCCCGC ACTACGTCCT GGACTACGAG AGCCGCTTCA AGGAGCAGGT GATCGAGGAG
TTCGCCGACG CCTATCTGCG CGGCGAGACG CCGATCCCCT GCGTGCGCTG CAACCAGACC
GTCAAGTTCC GCGACCTGCT GGACGTGGCC CGCGACCTGG GCGCCGAGGC CATGGCCACC
GGCCACTACG TGCAGCGCAG CTTCGCCGCG GGGGCCAATC GCCCGCAACT GCGCCGCGCC
GCGGACCCGG CCAAGGACCA GAGCTATTTC CTGTTCGCCA CCACGGCCGA GCAGCTGGAC
TTCCTGCGCT TCCCGCTGGG CGGCATGGAC AAGCCGACCG TGCGCCTGGT GGCCGCCGAA
CTTGGCCTGG CCATCGCCGA CAAGCCCGAC AGCCAGGACA TCTGCTTCGT GCCCGAGGGC
AAGTACACCA CGGTGATCGA CAGGATCCGG CCGCACGGCG CCCTGCCCGG CGACCTGGTG
CACATGGACG GCCGGGTGCT GGGCCGCCAC GAAGGCGTCA CCCGCTACAC CATCGGCCAG
CGCCGGGGCC TCAACATCGC GGTCGGCGAC CCGCTGTTCG TGGTCAAGAT CGACGCCGAC
AAGCGCCAGG TGATCGTCGG CCCGCGCGAG GCCCTGCTGA CCCAGGCCCT GTCGTTGAAA
GAGGGAAATT GGCTGGGCGT CGAGGACAGC CTGGAAGCCG CCGCCGCCGC CGGGGCGCCG
GTGCTGGCCC GCGTGCGCTC GACCCGCGAA CCCGTCCCGG GCCGCCTGAC CCTGGTCCCA
GGTCCCAATG GGGGCGAGCC GCGCCTGGTG TTCGACGGGC TGGAAGAAGG CGTCGCCCCC
GGCCAGGCCT GCGTGCTCTA CGACCCGGCC GACCCCGAGC GCGTGCTGGG CGGCGGCTTC
ATCGTGGCCA CGGAGCGGGC GGGGCTCTAG
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| Protein sequence | MAAMDADIAP FDTARTDHGL MDRAVEQARA AVGLPVGTRI VAAMSGGVDS TVTAALLAKA
GYDVVGVTLQ LYDHGAAITK KGACCAGQDI LDARMAAERI GIPHYVLDYE SRFKEQVIEE
FADAYLRGET PIPCVRCNQT VKFRDLLDVA RDLGAEAMAT GHYVQRSFAA GANRPQLRRA
ADPAKDQSYF LFATTAEQLD FLRFPLGGMD KPTVRLVAAE LGLAIADKPD SQDICFVPEG
KYTTVIDRIR PHGALPGDLV HMDGRVLGRH EGVTRYTIGQ RRGLNIAVGD PLFVVKIDAD
KRQVIVGPRE ALLTQALSLK EGNWLGVEDS LEAAAAAGAP VLARVRSTRE PVPGRLTLVP
GPNGGEPRLV FDGLEEGVAP GQACVLYDPA DPERVLGGGF IVATERAGL
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