Gene Caul_0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0983 
Symbol 
ID5898438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1039669 
End bp1040913 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content70% 
IMG OID641561465 
Productribonuclease BN 
Protein accessionYP_001682611 
Protein GI167644948 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.460306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACA ATGTTCCGCG ACGCCCGTTC CGGTCGTGGA TCGCCTCGCG CCCCTATCAT 
CTGGCGCCCT GGATCGCGCT GCTGGCCCTG GCGCCGTTCG CCTTCCCCAA GCGCCCCGCC
GCCTCCGCGG AAACTCCCAT CGACCACCCG CCCGGCCTGT CGGAGGCCCG GGCCATGCCG
CCGCAAGATT TCGACGAGGC CGAGCCCAAG CGCGGCCGCG CCGCCCGCCA CCCGCACCGC
ATTCCCTGGC GCGGCTGGCG CGACATCGTC TGGCGCACCG GCCGCGAGGT CAGCGTCGAC
CGCCTGCCGG CCGTGGCCGG GGGCGTGACC TTCTACACCC TGCTGGCCAT CTTCCCGGCC
ATCGGCGCCT TCGTCTCGCT GTACGGCCTG TTCGCCGACA TCGGCGGCGT CGAGAAACAG
CTGCGCGAGA TGTCCAGCGT CTTCCCCGCC AGCGTCGTCA ACATCATCGG CGAGCAGATG
CTGCGCCTGG CCAGCCAGGA ACAGGCCAAG CTGGGCGTGG CCTTCGTGGT CAGCCTGCTG
CTGTCGATCT GGAGCGCCAA CGCCAGCATG AAGGCGCTCT TCGACGGTCT GAACGTCGCC
TATGACGAGG ACGAGAAGCG CAACTTCGTC GCCAAGACGG CCTGGACCTA CGCCTTCACC
TTCTGCGCCC TGGTCTATGC CGTGATCCTG GCCGGGGTGC TGATCGGCGC GCCGATCGTC
ATGGAGCGCA TCGGCCTGAG CGCCGCGGCG GCGGTCTGGA TCCCGCTGCG CTGGCTGATC
GTGCTGGCGG TGACGGCCTT CGCCTTCGCC ATGCTCTACC GCTTCGCCCC CTGCCGGGCC
CGGCCCCGCT GGCGCTGGGT GATCTGGGGG GCGGTGTTCG GCGCCGCCGC CTGGCTGCTC
GGCTCGCTGG GCTTCTCGCT CTATGTCAAC AACATCGCCC ACTACGACGC CACCTACGGC
CCGCTGGGGG CGGTGATCGC CTTCATGGTC TGGATGTGGT TCTCGATCCT GACCGTGCTG
ATCGGCGCCG AGCTGAACGC CGAGATCGAG CACCAGACCG CCATCGACTC CACCACCGGC
CCCGAGAAGC CGATGGGCGA GCGCGGCGCC GCCATGGCCG ACACGGTCGG CCTGGCCTTC
CATCCCTGGG AGTTCATCCA GCGCGAAGCC GGGACGGTGA AACGGGTCTC GGGCCGATAC
TGGAGCCAGG CCCGGGGCCG AAAGGCGCCG CCCGCGGACC TATAA
 
Protein sequence
MTDNVPRRPF RSWIASRPYH LAPWIALLAL APFAFPKRPA ASAETPIDHP PGLSEARAMP 
PQDFDEAEPK RGRAARHPHR IPWRGWRDIV WRTGREVSVD RLPAVAGGVT FYTLLAIFPA
IGAFVSLYGL FADIGGVEKQ LREMSSVFPA SVVNIIGEQM LRLASQEQAK LGVAFVVSLL
LSIWSANASM KALFDGLNVA YDEDEKRNFV AKTAWTYAFT FCALVYAVIL AGVLIGAPIV
MERIGLSAAA AVWIPLRWLI VLAVTAFAFA MLYRFAPCRA RPRWRWVIWG AVFGAAAWLL
GSLGFSLYVN NIAHYDATYG PLGAVIAFMV WMWFSILTVL IGAELNAEIE HQTAIDSTTG
PEKPMGERGA AMADTVGLAF HPWEFIQREA GTVKRVSGRY WSQARGRKAP PADL