Gene Caul_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0980 
SymbolprfA 
ID5898435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1036049 
End bp1037053 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content69% 
IMG OID641561462 
Productpeptide chain release factor 1 
Protein accessionYP_001682608 
Protein GI167644945 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.636127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGCCG CGACCGACGG CGCCGAAATC GTCAAGCTCT CCAAGGAGCA CGCCGAGCTG 
CGCCCGGTGG CCGAGGCCGT CCAGGCCCTG GCCAAGCTGG CCGCCGAGCG CGCCGACCTC
GAGGAGATGA CCGCCGATCC CGAGATGGCC GCCATGGTCT CCGACGAGAT CCAGGCCCTG
GACGAGAAGC TGCCGGTCAT GGAGCGCGAG CTGGCCCTGA TGCTGGCCCC GCGCGACAAG
GACGAGAACG CCTCGGCCAT TCTCGAAGTG CGGGCCGGCA CGGGCGGCGA CGAGGCGGCC
CTGTTCGCCG GCGACCTGTT TCGCATGTAC CAGCGCTACG CCCAGCTGCA GGGCTGGAAG
GTCGAGGTCG ACAGCGTGTC CGAGGGCGAG ATGGGCGGCT ACAAGGAAAT CATCGCCTCG
GTCACCGGCG ACGGGGTGTT TGGCCGCTGG AAGTTCGAGA GCGGCGTGCA CCGCGTCCAG
CGCGTGCCGG CCACCGAGGC CCAAGGCCGC ATCCACACCT CGGCCGCCAC CGTCGCGGTG
CTGCCCGAGG CCGAGGACGT CGAGATCGAG ATCAACGACG CAGACATCCG CATCGACACC
TACCGCTCGT CCGGGGCCGG CGGCCAGCAC GTCAACAAGA CCGACTCCGC CGTCCGCATC
ACCCACTTGC CCACCGGCGT GGTGGTGACC AGCTCGGAAA AGTCCCAGCA CCAGAACCGC
GCCCGGGCCA TGAAGAACCT CAAGGCCCGG CTCTACGACC TGCAGCGCAC GGCGCTGGAC
ACCGCCCGCT CCGACGCCCG CAAGAGTCAG GTCGGCAGCG GCGACCGCTC CGAGCGCATC
CGCACCTACA ACTTCCCGCA GGGCCGGGTC ACCGACCACC GCATCAACCT GACGGTCTAC
AACCTGCCCA AGGTGATGGA GGGCGACGCC CTGGACGACA TCATCAAACC CCTGATCGCC
GAGGACCAGG CGGCCCGGCT GGCGAGCCTG GAAGAGGGCT ACTAG
 
Protein sequence
MGAATDGAEI VKLSKEHAEL RPVAEAVQAL AKLAAERADL EEMTADPEMA AMVSDEIQAL 
DEKLPVMERE LALMLAPRDK DENASAILEV RAGTGGDEAA LFAGDLFRMY QRYAQLQGWK
VEVDSVSEGE MGGYKEIIAS VTGDGVFGRW KFESGVHRVQ RVPATEAQGR IHTSAATVAV
LPEAEDVEIE INDADIRIDT YRSSGAGGQH VNKTDSAVRI THLPTGVVVT SSEKSQHQNR
ARAMKNLKAR LYDLQRTALD TARSDARKSQ VGSGDRSERI RTYNFPQGRV TDHRINLTVY
NLPKVMEGDA LDDIIKPLIA EDQAARLASL EEGY