| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0976 |
|---|
| Symbol | |
|---|
| ID | 5898431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 1032633 |
|---|
| End bp | 1033310 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641561458 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_001682604 |
|---|
| Protein GI | 167644941 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.244507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.547173 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC CGCTGTTGCT CGCCTTCGTC CTGTTCGCCT TCGCCACCGC CGGCACGCCC
GGTCCGAACA ACATGATGCT GCTGGCCTCG GGGGCGAACT TCGGCTTCCG CCGCACCGTG
CTGCACATCC TGGGAATCAG CGTCGGCCTG GGCGTGATGG TGCTGGCCAT GGGCCTGGGC
CTGGGCGGGG TGTTCAAGGC CTGGCCGGTG TTGCACGAGA TGCTGAAGTG GGCGGGCGGC
GGCTACATGC TGTGGCTGGC CTGGAGGATC GCCACGGCCA AGGGCGTTTC GGACAAGGGC
GCCGGTTCGC GGCCGATGAC CTTCCTGCAG GCCGCCGCCT TTCAGTGGGT CAATCCCAAG
GCCTGGGCGA TGGCCCTGAC GGCCACCACC ACCTACACGC CGGAGGGCTC GGCGATCGGC
GTGGTCTTCG TGGCGGGGAC CTTCATGCTG GTCGGTGCGC CCTGCAGCGC CGCCTGGGCG
GGCTTTGGCC AAGGGATGCG ACGGTTCCTC GACCGCCCGC GAGGGCTGCG GGCCTTCAAC
CTGACCATGG CCGTGCTGCT GGTCGCCTCG CTCTATCCGC TGGTGGTCGA GACCCGGCCG
GCCGGGGCGT CGCGGGAGGC CCCGCGCGAG CTGGCGTCCG ACCTGCCGGC CACGCCCCGG
TGGGCGTCGC GGGGGTAG
|
|---|
| Protein sequence | MTAPLLLAFV LFAFATAGTP GPNNMMLLAS GANFGFRRTV LHILGISVGL GVMVLAMGLG
LGGVFKAWPV LHEMLKWAGG GYMLWLAWRI ATAKGVSDKG AGSRPMTFLQ AAAFQWVNPK
AWAMALTATT TYTPEGSAIG VVFVAGTFML VGAPCSAAWA GFGQGMRRFL DRPRGLRAFN
LTMAVLLVAS LYPLVVETRP AGASREAPRE LASDLPATPR WASRG
|
|---|
| |