Gene Caul_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0968 
Symbol 
ID5898423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1019990 
End bp1022119 
Gene Length2130 bp 
Protein Length709 aa 
Translation table11 
GC content64% 
IMG OID641561450 
ProductTonB-dependent receptor 
Protein accessionYP_001682596 
Protein GI167644933 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAATC GGAAATGGCT CGCGGTGAGC GCCGCGGCCT TGGCGGTGTG CACGCCTTGG 
AGCGTCGCGC ATGCGCGGCA GACCACAAGC ACGCAACACG ACTCCCGGCA GGCCGCCGAA
GGTCCAAACA GCACCGTTCA AGAAGTCGTC GTCACCGCCT CGAAGACCGG GGGGCAGGCG
CTGCAAGCCG TGCCGATGGC GATCCAGGCG TTTTCGGGCG AGGAGCTGAA GGCGCGCAAT
ATCAGCACCG TGGGCGACCT GGTATCGACC ATACCGGGCG CCTTCGAAGG CTTCCGCCAA
TCGGTGGGCT CGCGCTTCTA CAATCTCCGG GGCGCCGTCA CGCAAAACGG CGACTCGCCG
CTCGGCTACT ATCTCGACGA CGTCCCGTTC ATCGTCACCA ACTTCGGCAT CGCGCCGCCG
GTGCGGTTCA TCGACATGGA CCGCGTGGAA GTCCTGCGGG GTCCGCAAGG CACGCTGTAT
GGCCAAGGCT CGTCAGGCGG CGTGTTCATC TTCCACACCC GCGATCCCAA CCTCAACGAA
ATCGAATACG CCGCCGAAGG CGAAGGCTCG AGCACGAGGG GCGCCGAAGG CTTGAACTAC
GGCGTCTCGG GCGCGGTTTC GGTGCCGATC ATCAAGGACA AGCTGGCGAT CCGCATCAGC
GGCGGCACCG CGCGCGACGC CGGGTGGGCC GACGCCTATT ACGGCCCCTA TGACGGCACG
CCGGACCAAA AAGGCGTCAA CAAAGCCAAG AACGACGATC TGCGTCTCGT CGCCTTGTTC
CGCCCGCGCG ACAACGTCGA GATTCGCGCC CAGTACTGGC ACTTCCAGCC GCGCCAGGAC
TTCACCGGCT TCACGGCGTC GGTCAAGCCG CCCTACTTCC AGAACACCGC GGGCCAACAG
GGCTTTTCCA ACGGCGACTT CAAGCTCTGG AGCCTCGCGG CGAAGGTCGA CTTTGACGGG
TTCTCCGTCA CGAGCGCGAC CAGCAATCTG GAAGGTGATT TCGGGATCCA CATTCCGCTG
TCGCCGTCGG GATCTTTCTC GAGCCGGTTT CTGCCCAAGA TGTTCGCCGA GGAAATTCGC
GTGAACTCCA CGACCGCCGG CCCTCTGCAC TGGGTCGCGG GCGCCTCCTA CCAGGATGGC
GAGGGTCCGC AGGTCAACGC GCTCATTCGT CCGGGCGTCA ACATCAATGC GAGCAACAAC
ACGCTGACCA AGAACTACGC GTTTTTCGGA GAGGTCAGCT ATGACCTGTT CGGCGGCAAG
CTGGTGCCGC TGGTCGGGCT GCGGACCTAT CACGACGACC GGTCGTTCTC GGATGGGGCC
TCGTCCGTGC CCACCAACGC CGACGTCAAC ACCTGGCGGC TCAACCTGGC CTATCTGCCC
AGCGACAATC TGACGATGTT CGTGTCCGCG GCCACCGGCT TCCGCCCGGG CATCGTGCAG
TCTCGCGTGC AAGTCGAATC TCTGATCCTG GCGGGCGTAC CGGCATCCGT GGCCCTCGAG
CCAGAAGAAT CGAAGAACTA CGAGTTCGGC GTGAAGTGGC GCAACGACGA CAGGTCTTGG
ACGGTCGGAC TAAACCTCTA CCAGCTGCAA TATACCAATC TCCAGACCTC GGTCACCGGC
GGCATCGACG GGGTGAACGG CTTCGCGAAC TTCGGCGACG CAACCACCAA GGGCGTCGAC
CTTGAAGTTC ACTGGCGCAC GCCGATCAAG GGACTTGGCC TTGGACTGGT GGGCAACTTC
AACGACAGCA AGTACGACAC CGTCAACCCG GTCGTGGCGG CGGCGCAGCC TCAGCTGCAC
CCGGGCTCGC GTCTGCTCAA CACGCTCGAC CAGAACTATC GGTTCGACGT CAACTACAGC
CGAGATCTCG CCAACGGCCT GGAAGGGTTC GGCAATCTGG CGCTGAGCCA TAGCGGCGAC
CGTCTGCAGA CCAACGGGTT TCCCACGCGT CCCTACGACC AGATCAGCAC CACGATTGGC
GTTCGCCGCG GCCAGTGGGA ACTGGCGTTC GTCGGCAACA ACCTTGCCGA TGAGCGTGGT
CCGACCTTCG TCGGCACCAA TGGTCCGATG TCGGGTTCCG GCCCCACGCC TCGAACCCTG
GGCTTCCGCC TCCGCGTCAC TTCCCAGTAA
 
Protein sequence
MQNRKWLAVS AAALAVCTPW SVAHARQTTS TQHDSRQAAE GPNSTVQEVV VTASKTGGQA 
LQAVPMAIQA FSGEELKARN ISTVGDLVST IPGAFEGFRQ SVGSRFYNLR GAVTQNGDSP
LGYYLDDVPF IVTNFGIAPP VRFIDMDRVE VLRGPQGTLY GQGSSGGVFI FHTRDPNLNE
IEYAAEGEGS STRGAEGLNY GVSGAVSVPI IKDKLAIRIS GGTARDAGWA DAYYGPYDGT
PDQKGVNKAK NDDLRLVALF RPRDNVEIRA QYWHFQPRQD FTGFTASVKP PYFQNTAGQQ
GFSNGDFKLW SLAAKVDFDG FSVTSATSNL EGDFGIHIPL SPSGSFSSRF LPKMFAEEIR
VNSTTAGPLH WVAGASYQDG EGPQVNALIR PGVNINASNN TLTKNYAFFG EVSYDLFGGK
LVPLVGLRTY HDDRSFSDGA SSVPTNADVN TWRLNLAYLP SDNLTMFVSA ATGFRPGIVQ
SRVQVESLIL AGVPASVALE PEESKNYEFG VKWRNDDRSW TVGLNLYQLQ YTNLQTSVTG
GIDGVNGFAN FGDATTKGVD LEVHWRTPIK GLGLGLVGNF NDSKYDTVNP VVAAAQPQLH
PGSRLLNTLD QNYRFDVNYS RDLANGLEGF GNLALSHSGD RLQTNGFPTR PYDQISTTIG
VRRGQWELAF VGNNLADERG PTFVGTNGPM SGSGPTPRTL GFRLRVTSQ