Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0968 |
Symbol | |
ID | 5898423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 1019990 |
End bp | 1022119 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641561450 |
Product | TonB-dependent receptor |
Protein accession | YP_001682596 |
Protein GI | 167644933 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAAATC GGAAATGGCT CGCGGTGAGC GCCGCGGCCT TGGCGGTGTG CACGCCTTGG AGCGTCGCGC ATGCGCGGCA GACCACAAGC ACGCAACACG ACTCCCGGCA GGCCGCCGAA GGTCCAAACA GCACCGTTCA AGAAGTCGTC GTCACCGCCT CGAAGACCGG GGGGCAGGCG CTGCAAGCCG TGCCGATGGC GATCCAGGCG TTTTCGGGCG AGGAGCTGAA GGCGCGCAAT ATCAGCACCG TGGGCGACCT GGTATCGACC ATACCGGGCG CCTTCGAAGG CTTCCGCCAA TCGGTGGGCT CGCGCTTCTA CAATCTCCGG GGCGCCGTCA CGCAAAACGG CGACTCGCCG CTCGGCTACT ATCTCGACGA CGTCCCGTTC ATCGTCACCA ACTTCGGCAT CGCGCCGCCG GTGCGGTTCA TCGACATGGA CCGCGTGGAA GTCCTGCGGG GTCCGCAAGG CACGCTGTAT GGCCAAGGCT CGTCAGGCGG CGTGTTCATC TTCCACACCC GCGATCCCAA CCTCAACGAA ATCGAATACG CCGCCGAAGG CGAAGGCTCG AGCACGAGGG GCGCCGAAGG CTTGAACTAC GGCGTCTCGG GCGCGGTTTC GGTGCCGATC ATCAAGGACA AGCTGGCGAT CCGCATCAGC GGCGGCACCG CGCGCGACGC CGGGTGGGCC GACGCCTATT ACGGCCCCTA TGACGGCACG CCGGACCAAA AAGGCGTCAA CAAAGCCAAG AACGACGATC TGCGTCTCGT CGCCTTGTTC CGCCCGCGCG ACAACGTCGA GATTCGCGCC CAGTACTGGC ACTTCCAGCC GCGCCAGGAC TTCACCGGCT TCACGGCGTC GGTCAAGCCG CCCTACTTCC AGAACACCGC GGGCCAACAG GGCTTTTCCA ACGGCGACTT CAAGCTCTGG AGCCTCGCGG CGAAGGTCGA CTTTGACGGG TTCTCCGTCA CGAGCGCGAC CAGCAATCTG GAAGGTGATT TCGGGATCCA CATTCCGCTG TCGCCGTCGG GATCTTTCTC GAGCCGGTTT CTGCCCAAGA TGTTCGCCGA GGAAATTCGC GTGAACTCCA CGACCGCCGG CCCTCTGCAC TGGGTCGCGG GCGCCTCCTA CCAGGATGGC GAGGGTCCGC AGGTCAACGC GCTCATTCGT CCGGGCGTCA ACATCAATGC GAGCAACAAC ACGCTGACCA AGAACTACGC GTTTTTCGGA GAGGTCAGCT ATGACCTGTT CGGCGGCAAG CTGGTGCCGC TGGTCGGGCT GCGGACCTAT CACGACGACC GGTCGTTCTC GGATGGGGCC TCGTCCGTGC CCACCAACGC CGACGTCAAC ACCTGGCGGC TCAACCTGGC CTATCTGCCC AGCGACAATC TGACGATGTT CGTGTCCGCG GCCACCGGCT TCCGCCCGGG CATCGTGCAG TCTCGCGTGC AAGTCGAATC TCTGATCCTG GCGGGCGTAC CGGCATCCGT GGCCCTCGAG CCAGAAGAAT CGAAGAACTA CGAGTTCGGC GTGAAGTGGC GCAACGACGA CAGGTCTTGG ACGGTCGGAC TAAACCTCTA CCAGCTGCAA TATACCAATC TCCAGACCTC GGTCACCGGC GGCATCGACG GGGTGAACGG CTTCGCGAAC TTCGGCGACG CAACCACCAA GGGCGTCGAC CTTGAAGTTC ACTGGCGCAC GCCGATCAAG GGACTTGGCC TTGGACTGGT GGGCAACTTC AACGACAGCA AGTACGACAC CGTCAACCCG GTCGTGGCGG CGGCGCAGCC TCAGCTGCAC CCGGGCTCGC GTCTGCTCAA CACGCTCGAC CAGAACTATC GGTTCGACGT CAACTACAGC CGAGATCTCG CCAACGGCCT GGAAGGGTTC GGCAATCTGG CGCTGAGCCA TAGCGGCGAC CGTCTGCAGA CCAACGGGTT TCCCACGCGT CCCTACGACC AGATCAGCAC CACGATTGGC GTTCGCCGCG GCCAGTGGGA ACTGGCGTTC GTCGGCAACA ACCTTGCCGA TGAGCGTGGT CCGACCTTCG TCGGCACCAA TGGTCCGATG TCGGGTTCCG GCCCCACGCC TCGAACCCTG GGCTTCCGCC TCCGCGTCAC TTCCCAGTAA
|
Protein sequence | MQNRKWLAVS AAALAVCTPW SVAHARQTTS TQHDSRQAAE GPNSTVQEVV VTASKTGGQA LQAVPMAIQA FSGEELKARN ISTVGDLVST IPGAFEGFRQ SVGSRFYNLR GAVTQNGDSP LGYYLDDVPF IVTNFGIAPP VRFIDMDRVE VLRGPQGTLY GQGSSGGVFI FHTRDPNLNE IEYAAEGEGS STRGAEGLNY GVSGAVSVPI IKDKLAIRIS GGTARDAGWA DAYYGPYDGT PDQKGVNKAK NDDLRLVALF RPRDNVEIRA QYWHFQPRQD FTGFTASVKP PYFQNTAGQQ GFSNGDFKLW SLAAKVDFDG FSVTSATSNL EGDFGIHIPL SPSGSFSSRF LPKMFAEEIR VNSTTAGPLH WVAGASYQDG EGPQVNALIR PGVNINASNN TLTKNYAFFG EVSYDLFGGK LVPLVGLRTY HDDRSFSDGA SSVPTNADVN TWRLNLAYLP SDNLTMFVSA ATGFRPGIVQ SRVQVESLIL AGVPASVALE PEESKNYEFG VKWRNDDRSW TVGLNLYQLQ YTNLQTSVTG GIDGVNGFAN FGDATTKGVD LEVHWRTPIK GLGLGLVGNF NDSKYDTVNP VVAAAQPQLH PGSRLLNTLD QNYRFDVNYS RDLANGLEGF GNLALSHSGD RLQTNGFPTR PYDQISTTIG VRRGQWELAF VGNNLADERG PTFVGTNGPM SGSGPTPRTL GFRLRVTSQ
|
| |