Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0962 |
Symbol | |
ID | 5898417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 1011964 |
End bp | 1013211 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641561444 |
Product | major facilitator transporter |
Protein accession | YP_001682590 |
Protein GI | 167644927 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.419565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCC CCGCCCGCCA GAACACCCGG CTCTTGAAGC TCCTGACCTA TCTGATGTTC GCGATGTTCG CGATGACGAC GGATTCGGTC GGGGTGATCA TCCCGCAGGT GATCAAGCAG TTTTCCCTCG GCATGACCGT CGGGGGCGCC TTCCAGTACG CCACGATGTC GGGGATCTCC ATCTCGGCGC TGGCGCTGGG TTTCCTGGCC GATCGGTTCG GCCGCAAGTG GACGATCATC GCGGGGCTGG TGCTGTTCGG CGCGTCTTCA GCCCTGTTCG CCGCTGGCCA CGACTTCCTG TTCTTCGTGG GGCTGCTGTT CATTTCGGGC GTCGGCATCG GCGTGTTCAA GGCCGGCGCC CTGGCGCTGA TCGGCGACAT CTCCGGCTCG ACCCGCGAAC ATGCCGCCAC GATGAACACG GTCGAAGGCT TTTTCGGCGT CGGCGCGATC ATCGGCCCGG CGATCGTCGC CAAGCTTCTC GCGTCGGGAG CCGAATGGAA ATGGCTCTAT GTCATCGCCG CGGTGCTTTG CGGGGTCCTG GTGCTGGCCG CCTCGGCGGC CAAGTATCCC AAGCCGCCCG TCCGCAAGGC CGAGCAGGAG CCGCGCCTGC GCCAGACGCT GGGCTTGCTG CGCGATCCCT TCGCCCTGGC GTTCGGCCTG GCGCTGATGC TCTACGTGGC GGCCGAGGCG GCGGTCTATG TCTGGGCCCC GACCTATCTG AGCGGCTATA CGGGCAGCGC GGCCTGGTTC GCGCTCTACG TCGTCTCGAT CTTCTTCGTC CTGCGCGCGG CCGGGCGGTT CCTGGGCGCC TGGCTCCTGT CCCGCTTCCG CTGGTCGGTG GTGGTGGCCC TGAGCACGGG CGGGGTGCTG GTCTGCTTCC TGGCCAGCGC GATCGGCCAC CGCGGGGTCG GCGCGATCGC CCTGCCGCTG TCAGGACTGT TCATGTCGGT GCTCTACCCG ACGATCAATT CCAAGGGCAT CAGCTGCTTC GCCAAGTCAC AGCACGGCGC CATCGCCGGC CTGCTGCTGT TCTTCACCTG CGCCAGCGCC GTGCTCGCCC CCTTGGCGAT GGGCGCGCTC AGCGACGCCA TGGGCGACGC CAAATACAGT CTCTACCTGG CTACCGCCTT CGCCGCCGCC CTGGCCGTGC TGGCGGTGGT CAACGCGGCC CTCGAACCCA CGCGGGCGCG GCTGGCCGAG CGTGACAGCG AAGACTATCT GCCAGCCGAG GCGCTCACCG AGCGGTGA
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Protein sequence | MTVPARQNTR LLKLLTYLMF AMFAMTTDSV GVIIPQVIKQ FSLGMTVGGA FQYATMSGIS ISALALGFLA DRFGRKWTII AGLVLFGASS ALFAAGHDFL FFVGLLFISG VGIGVFKAGA LALIGDISGS TREHAATMNT VEGFFGVGAI IGPAIVAKLL ASGAEWKWLY VIAAVLCGVL VLAASAAKYP KPPVRKAEQE PRLRQTLGLL RDPFALAFGL ALMLYVAAEA AVYVWAPTYL SGYTGSAAWF ALYVVSIFFV LRAAGRFLGA WLLSRFRWSV VVALSTGGVL VCFLASAIGH RGVGAIALPL SGLFMSVLYP TINSKGISCF AKSQHGAIAG LLLFFTCASA VLAPLAMGAL SDAMGDAKYS LYLATAFAAA LAVLAVVNAA LEPTRARLAE RDSEDYLPAE ALTER
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