Gene Caul_0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0918 
Symbol 
ID5898373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp964601 
End bp966451 
Gene Length1851 bp 
Protein Length616 aa 
Translation table11 
GC content71% 
IMG OID641561401 
Productlipid ABC transporter ATPase/inner membrane protein 
Protein accessionYP_001682547 
Protein GI167644884 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID[TIGR02204] ABC transporter, permease/ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.624051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.180079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACG TGAACGCGGG CGAGATTTCG ACCGACGGCA GGCCGAGCGC GGGCGCGGAG 
TTGGTGCAAA ATCTGGCCGA AGCCGCCAAT CGTCGCCCTC GCCGCAAGGA CATCCGTCCG
CTGGCCCATC TGCTGCCGTT CGTGCGCCGC CATATCGGCG ACGCCCTGGC CGCCGGCTTC
TTCCTGCTGT TCTCGACCAG CGCCACCCTG GGCCTGACGG GCGCGTTCAA GGGCGTGATC
GACAAGGGCT TCACCAAGGG TTCGGGCGAC GCGATCAACA GCGCCTTCAT CGGACTGGGC
GCGGTGGCGC TGCTGCTGGC CGTGGCCACG GCCCTGCGGT TCTTCTTCGT CACCCGGCTG
GGCGAGCGCG TGGTCGCCGA CCTGCGCCGC GCGCTCTATG GCCACACCCT GACGCTGGAC
CCGGCCTTCT TCCTCAAGAC CCGCACCGGC GAGGTGCTGT CGCGGATGAC GACCGACATC
ACCATCATCG AGCAATTGGT GGGGACCAGC GTCTCGGTCG CCCTGCGCAA CATCCTCAGC
CTGATCGGCG GGCTGGGCTA CATGACCTTT GTCAGTCCCA AGCTGGCGGG CTTCATCGTG
CTGATGGTGC CGGTGATCCT GGCGCCGATC TTCCTGCTGG GCCGCAATGT CCGCAAGCTG
TCGGTCAGCG CCCAGGACAA GTTCGCCGAC GCGGTTGGCT ATGCCGGCGA GAGCCTGGAC
GCCCTGGACA CCGTCCAGGC CTTCGGGCGC GAGGGCGCGG CCGACACCCG GTTCGGCGGC
GCCGTAGAAG GCGCTTACAA AGCTTCCGTC AAGCGGATCA CCGCGCGGGC CGGCATGACC
GCCGTGGTCA TGGCTCTGGC GTTCTGCGGC GTCGCCCTGT TGCTGTGGGT GGGCGCGCAT
CTGGTGCTGT CGGGCGAGAT GACGGGCGGG ACCCTGGCCC AGTTCGCCCT GCTGGCGATC
TTCACCGCCG GCTCGGTCGG CGCGCTGGGC GAGGTCTGGG GCGACGTCCA GAAGGCGGCC
GGCGCCATGG AGCGGATCTC CGACCTGCTC AACGCCGAGC CCGGCATCGC CGCGCCGGAA
AAGCCCCAGA CCTTGCCGGT TCCGCCCCGG GGCGCGATCG CCTTCGAGAA CGTCACCTTC
GCCTATCCCG GTCGCCCCGA CCTGCCGGCC CTCAAGGGCT TCGACCTCAC CGTAAAGCCC
GGCGAGACCG TCGCCCTGGT CGGACCCTCG GGGGCGGGCA AGAGCACCGT CCTGCGGCTG
CTGCTGCGCT TCTACGACCC CCAGGAGGGC GTGGTGCGGC TGGACGGCGT CGACCTGCGC
GCCGCCGACC CTGCGCAGGT GCGCGACCGC ATGGCCCTGG TGGCCCAGGA CTCGCCGCTG
TTCTCCGGCT CGGCGATGGA CAACATCCGC TTCGGCCGCG AGGACGCCAC CGAGGACCAG
GCCCGCGCCG CCGCCGCCGC CGCCCAGGCC ACGACCTTCA TCGAGGCCCT ACCGCAGGGC
TTCGACACCC CGGTGGGCGA GCGGGCCAAG ACCCTGTCGG GCGGCCAGCG CCAGCGCCTG
GCCATCGCCC GCGCCCTGGT CCGCCAGGCC CCGATCCTGC TGCTCGACGA GGCCACCAGC
GCCCTGGACG CCGAGAACGA GCGGCTGGTT CAGAAGGCCT TGCACGACGC CATGTCGGGC
CGCACCACCC TGGTCATCGC CCACCGCCTG GCCACCGTGC TCAAGGCCGA CCGCATCGTG
GTCATGGAGA ACGGCCGGGT GGTCGAGCAG GGCACCCACG CCGAGCTGTC GGCCCAGGGC
GGTCTGTACG CGAAGCTGGC AAGGCTGCAG TTCGGGGTGG AGGCGGCGTA G
 
Protein sequence
MSDVNAGEIS TDGRPSAGAE LVQNLAEAAN RRPRRKDIRP LAHLLPFVRR HIGDALAAGF 
FLLFSTSATL GLTGAFKGVI DKGFTKGSGD AINSAFIGLG AVALLLAVAT ALRFFFVTRL
GERVVADLRR ALYGHTLTLD PAFFLKTRTG EVLSRMTTDI TIIEQLVGTS VSVALRNILS
LIGGLGYMTF VSPKLAGFIV LMVPVILAPI FLLGRNVRKL SVSAQDKFAD AVGYAGESLD
ALDTVQAFGR EGAADTRFGG AVEGAYKASV KRITARAGMT AVVMALAFCG VALLLWVGAH
LVLSGEMTGG TLAQFALLAI FTAGSVGALG EVWGDVQKAA GAMERISDLL NAEPGIAAPE
KPQTLPVPPR GAIAFENVTF AYPGRPDLPA LKGFDLTVKP GETVALVGPS GAGKSTVLRL
LLRFYDPQEG VVRLDGVDLR AADPAQVRDR MALVAQDSPL FSGSAMDNIR FGREDATEDQ
ARAAAAAAQA TTFIEALPQG FDTPVGERAK TLSGGQRQRL AIARALVRQA PILLLDEATS
ALDAENERLV QKALHDAMSG RTTLVIAHRL ATVLKADRIV VMENGRVVEQ GTHAELSAQG
GLYAKLARLQ FGVEAA