Gene Caul_0910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0910 
Symbol 
ID5898365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp959524 
End bp960135 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content67% 
IMG OID641561393 
Product3-octaprenyl-4-hydroxybenzoate carboxy-lyase 
Protein accessionYP_001682539 
Protein GI167644876 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0271281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACC TCCCCGCCTC GCCGGACAAG CCTCGTCTCA TCGTCGGAAT CTCTGGTGCG 
TCAGGGGTTG TGTACGGTCT CAGGGCGCTG GACGCCTGCC GCGAACTGGG CGTCGAGAGC
CATCTGGTGC TGTCCAAATC GGCGGCCTTG ACCCTGTCGC AGGAGACCGA ATTTTCCGTC
GCCCAGGTCA ATGAGAAGGC GGATATCGTG CATCGTGCGG GCGATGTGGG GGCGTCGATC
GCGTCAGGGT CGTATCGCAC GCTGGGCATG ATCGTCGCCC CGTGCTCGGT GCGCACCATG
AGCGAGATCG CAACGGGCGT AACGGCTTCG CTTCTGACTC GCGCCGCCGA CGTGACGCTG
AAGGAGCGCC GGCCGCTGGT GCTGATGGTT CGCGAGACGC CGCTGCACCT GGGCCACCTG
CGCACCATGA CCAAGCTGGC CGAGATGGGC GCGGTGATCG CTCCGCCGCT TCCCGCGTTC
TATGCCAAGC CGCGATCGAT CGCCGAGATG GTCGACCAGT CGGTGGGCCG GGCGCTCGAC
CTGTTCGGCC TGTCCTGGCG GCCGGTCAAG CGCTGGGGCG AAGACCTGGC GACCATTACC
GGAGAGGCCT GA
 
Protein sequence
MSDLPASPDK PRLIVGISGA SGVVYGLRAL DACRELGVES HLVLSKSAAL TLSQETEFSV 
AQVNEKADIV HRAGDVGASI ASGSYRTLGM IVAPCSVRTM SEIATGVTAS LLTRAADVTL
KERRPLVLMV RETPLHLGHL RTMTKLAEMG AVIAPPLPAF YAKPRSIAEM VDQSVGRALD
LFGLSWRPVK RWGEDLATIT GEA