Gene Caul_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0889 
Symbol 
ID5898344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp942611 
End bp943645 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content71% 
IMG OID641561372 
Productglycosyl transferase family protein 
Protein accessionYP_001682518 
Protein GI167644855 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0302002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.175514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCG CCCCCAAGCC GCCCGGCCCC GTCCTCGTCT ACGCCCCCGA TCGCGGGATC 
GGCGACCTGA TGTGGCATCT GCCGACCTTT CGGGCCATCG CCGCGACCAC GCCGGAGAAG
CAAGTGGTGC TGGCCGCGCG GCCGTCGAGC CATGCGCGGC AAGTGCTGGC GGTCGAGCCG
TCGATCAGCA AAGTCGTCTA TGCCCGACAT TTCACCGGTA CGCTGAGGGG CGTGCACGAA
GTGCTCGACT TCTGGCGGAT CTGCCGCGAG GTGAAGCCGC GCGCTGTGTG GATCCTGGAG
AAGATCGGTC GTCCCGCCCA AGCCGCCTGG TTGGCCGGCG TGCCCGAGCG GCGCGGCTTT
GGCCTGGGTC ACAGGAGCCA GGAGCAATGG CTGCAGGGAC CGTTCCTGCC CAAGTCCATG
CGCCCCGCCC ACCGGCTGGA CAAACTGGCG GCCTTCGAGG CCCTGCACGG GTTGAGCGTC
GACAGCCGCG AGCCGACCCT GCTGCTCGAC CCCAAGGCCG TGGCGGCCGT CAAGGCCCGG
TTCGGGGATC GGCCCGGTCC CTGGCTGGTG CTGGGCGTCG GGGCCAGCGA GCCGGCCCGC
ACCTGGCCCG CCGAGCGTTT CGCCGCCGTG TCGCAAGCCC TGGCAGACCT GTTTCCGACG
GTGTTCTGGC TGGGCGGACC CAACGACGCC CCGCGTCTGA AGGCCACGGT CGAGGCTCAG
CCGCCCCTCT CCCAGGACTT GGGCCGCGAC ATCCTGGCCT GCGACCTGCC GCTCGACCAG
GCCGCCGCCC TGATCGCCCT GTCGGCCGGG TTCCTGGGCA ATGATTCGGG GCCGCTGAAC
GTCGCCGCCT CGGTGGGCCG GCCGGCCATC GGCCTGATGG GCACAAGCCC CGTTCCGGTC
TATTCGCGCT GGCTTTCCCG GCTCGACGGC GGGGAAGGGC GGATCGCCGA TATTTCGGTC
GATCAGGCGC TCGAAGCCGT TCGAACCCGG TTCACCGACG AGGCCTGGGC CAACCGCGAC
ATCCCGGCGA CTTGA
 
Protein sequence
MSPAPKPPGP VLVYAPDRGI GDLMWHLPTF RAIAATTPEK QVVLAARPSS HARQVLAVEP 
SISKVVYARH FTGTLRGVHE VLDFWRICRE VKPRAVWILE KIGRPAQAAW LAGVPERRGF
GLGHRSQEQW LQGPFLPKSM RPAHRLDKLA AFEALHGLSV DSREPTLLLD PKAVAAVKAR
FGDRPGPWLV LGVGASEPAR TWPAERFAAV SQALADLFPT VFWLGGPNDA PRLKATVEAQ
PPLSQDLGRD ILACDLPLDQ AAALIALSAG FLGNDSGPLN VAASVGRPAI GLMGTSPVPV
YSRWLSRLDG GEGRIADISV DQALEAVRTR FTDEAWANRD IPAT