Gene Caul_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0886 
Symbol 
ID5898341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp940418 
End bp940930 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content73% 
IMG OID641561369 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001682515 
Protein GI167644852 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.324389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.404491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGATG GGCGACAGGA GGACGAGGCT TTCGCGGCAT GGCTGGCGCC GCACCTGGCC 
GCCCTGCGCC GGGTCAGCCG CGCCTTCGCC GAGCCGGCCG ACCAGCACGA CTTGATGCAG
GAGCTGACCC TGGCGCTGTG GAAGGCCCGG CCGCGCTTTC GGGGCGAAAG CACCGGCGCC
ACCTTCGTCC ACCGCGTGGC CCACAACGCC GCCCTGACCT GGCGGCGCGG CGAGACCCGG
CGGCGAAGAC GGCGGGACGC GGTCGCCGCC GAGCTGGCGT TGCGCCTGGA CGATCCGGAC
GCGCCCGAGG CTGGACTGCT GGAACGGCTC TACGCCGCGA TCCGCACCCT GCCGCCGGTG
GAGCGGTCGC TGATCCTGCT GTCGCTGGAC GGCCTGGCCT ATGGCGAGAT CGCCCGGCTG
CACGGCCTGT CTCAAACCAA TGTCGGCGCG CGCCTGACCC GCATCCGCGC CCGACTCTCG
ATCCTGGTGA AGGAGGACGG CGATGGACTT TGA
 
Protein sequence
MGDGRQEDEA FAAWLAPHLA ALRRVSRAFA EPADQHDLMQ ELTLALWKAR PRFRGESTGA 
TFVHRVAHNA ALTWRRGETR RRRRRDAVAA ELALRLDDPD APEAGLLERL YAAIRTLPPV
ERSLILLSLD GLAYGEIARL HGLSQTNVGA RLTRIRARLS ILVKEDGDGL