Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0886 |
Symbol | |
ID | 5898341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 940418 |
End bp | 940930 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641561369 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001682515 |
Protein GI | 167644852 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.324389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.404491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGATG GGCGACAGGA GGACGAGGCT TTCGCGGCAT GGCTGGCGCC GCACCTGGCC GCCCTGCGCC GGGTCAGCCG CGCCTTCGCC GAGCCGGCCG ACCAGCACGA CTTGATGCAG GAGCTGACCC TGGCGCTGTG GAAGGCCCGG CCGCGCTTTC GGGGCGAAAG CACCGGCGCC ACCTTCGTCC ACCGCGTGGC CCACAACGCC GCCCTGACCT GGCGGCGCGG CGAGACCCGG CGGCGAAGAC GGCGGGACGC GGTCGCCGCC GAGCTGGCGT TGCGCCTGGA CGATCCGGAC GCGCCCGAGG CTGGACTGCT GGAACGGCTC TACGCCGCGA TCCGCACCCT GCCGCCGGTG GAGCGGTCGC TGATCCTGCT GTCGCTGGAC GGCCTGGCCT ATGGCGAGAT CGCCCGGCTG CACGGCCTGT CTCAAACCAA TGTCGGCGCG CGCCTGACCC GCATCCGCGC CCGACTCTCG ATCCTGGTGA AGGAGGACGG CGATGGACTT TGA
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Protein sequence | MGDGRQEDEA FAAWLAPHLA ALRRVSRAFA EPADQHDLMQ ELTLALWKAR PRFRGESTGA TFVHRVAHNA ALTWRRGETR RRRRRDAVAA ELALRLDDPD APEAGLLERL YAAIRTLPPV ERSLILLSLD GLAYGEIARL HGLSQTNVGA RLTRIRARLS ILVKEDGDGL
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