Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0879 |
Symbol | |
ID | 5898334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 932653 |
End bp | 934122 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641561362 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001682508 |
Protein GI | 167644845 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.318917 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGA CGGTTCTCGT CGTCGACGAC GATCCGACTC AACGTCGCCT GATCCAAGCC GTGCTCGAGC GCGACGGCTT CGCGGTCTCG CACGCCGAGA ACGGAGACGC CGCCATGGCC CATCTGGCCA GCGGCGCGCC TGTCGACGTG GTCCTGTTGG ACCTCGTCAT GCCCGGCCTG TCTGGTCAGG ACACCCTGAA GGAAATGCGC GCGCGCGGCT TCGCGCAGCC CGTCATCGTG CTCACGGCCA GCGGCGGCGT CGACACCGTG GTGCGCGCCA TGCAGGCCGG CGCCACCGAC TTCTTCATCA AGCCCGCCTC CCCTGAGCGG ATCACCGTCT CGATCCGCAA CGCCCTGTCG ATGGGCGACC TGAAGGGCGA GGTCGAGCGC CTGACCAAGC GGACCAACAA CCGCACCACC TTCGCCGACC TGATCGGCGC CTCGCCGGCC ATGACCCTGG TCAAGCGCAT GGGCGAGCGG GCGGCCAAGA GCTCCATCCC CATCCTGATC ACCGGCGAGA GCGGGGTCGG CAAGGAGCTG ATCGCCCGCG CCGTGCACGG CGGCTCGGAT CGGGCCGGCA AGCCGTTCGT AGCCGTCAAC TGCGGCGCGA TCCCAGAGAA CCTCGTCGAG TCGATCCTGT TCGGCCACGA GAAGGGCAGC TTCACCGGCG CGACCGACAA GCACCTGGGC AAGTTCAAGG AGGCCGACGG CGGCACCCTG TTCCTCGACG AGGTCGGCGA ACTGCCGCTC GACATGCAGG TCAAGCTGCT GCGCGCGCTG CAGGAAGGCG AGATCGATCC GGTCGGCTCC AAGCGCTCGC AGAAGGTGGA CGTGCGCATC GTCTCGGCCA CCAATCGCGA CGTCGCCCAC GCCGTCGAGC AGGGCCGGTT CCGCGAGGAC CTCTATTACC GCCTGAACGT CTTCCCGATC GAGGCCCCGT CCCTGCGCGA ACGGCGCGAG GACATCCCGG CCCTGGTCGA GGCCTTCATC CGCCGCTTCA ACGTCGAAGA AGGCAAGCGG GTGGTCGGCG CGACGCCGGA GACGCTGAAG ATCCTGTCGG TCTTCGACTG GCCCGGCAAC GTGCGCCAGC TGGAGAACGC GGTCTATCGC GCCATCATCC TAGCCGACGC CCCCTATCTG CAGCCCTACG ACTTCCCGGC GGTTTCAGGA ATCATGGCCC CGCCGCCCGA AGCGCTGGCG GCGGTGCAAC CCGACCTGCC GGCCGTGCTG CAGGCCGCCC ACGCCGTCAT GGCCCGCTCG CCGAACATGG ATTCGCCGGT GCGCATCCTC GACGACCGCG GTCACCTGAG GACCCTGGAA GAGATCGAGC GCGACCTGAT CCAGCACGCC ATCGAGGTCT ATGCCGGCCA CATGAGCGAG GTCGCCCGCC GCCTGGGCAT CGGCCGCTCG ACCCTCTATC GCAAGGTCCG CGAGCAGGGC ATCGAGATCG ACCTGAAGGA AGCCTCGTGA
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Protein sequence | MTKTVLVVDD DPTQRRLIQA VLERDGFAVS HAENGDAAMA HLASGAPVDV VLLDLVMPGL SGQDTLKEMR ARGFAQPVIV LTASGGVDTV VRAMQAGATD FFIKPASPER ITVSIRNALS MGDLKGEVER LTKRTNNRTT FADLIGASPA MTLVKRMGER AAKSSIPILI TGESGVGKEL IARAVHGGSD RAGKPFVAVN CGAIPENLVE SILFGHEKGS FTGATDKHLG KFKEADGGTL FLDEVGELPL DMQVKLLRAL QEGEIDPVGS KRSQKVDVRI VSATNRDVAH AVEQGRFRED LYYRLNVFPI EAPSLRERRE DIPALVEAFI RRFNVEEGKR VVGATPETLK ILSVFDWPGN VRQLENAVYR AIILADAPYL QPYDFPAVSG IMAPPPEALA AVQPDLPAVL QAAHAVMARS PNMDSPVRIL DDRGHLRTLE EIERDLIQHA IEVYAGHMSE VARRLGIGRS TLYRKVREQG IEIDLKEAS
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