Gene Caul_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0879 
Symbol 
ID5898334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp932653 
End bp934122 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content68% 
IMG OID641561362 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001682508 
Protein GI167644845 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.318917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA CGGTTCTCGT CGTCGACGAC GATCCGACTC AACGTCGCCT GATCCAAGCC 
GTGCTCGAGC GCGACGGCTT CGCGGTCTCG CACGCCGAGA ACGGAGACGC CGCCATGGCC
CATCTGGCCA GCGGCGCGCC TGTCGACGTG GTCCTGTTGG ACCTCGTCAT GCCCGGCCTG
TCTGGTCAGG ACACCCTGAA GGAAATGCGC GCGCGCGGCT TCGCGCAGCC CGTCATCGTG
CTCACGGCCA GCGGCGGCGT CGACACCGTG GTGCGCGCCA TGCAGGCCGG CGCCACCGAC
TTCTTCATCA AGCCCGCCTC CCCTGAGCGG ATCACCGTCT CGATCCGCAA CGCCCTGTCG
ATGGGCGACC TGAAGGGCGA GGTCGAGCGC CTGACCAAGC GGACCAACAA CCGCACCACC
TTCGCCGACC TGATCGGCGC CTCGCCGGCC ATGACCCTGG TCAAGCGCAT GGGCGAGCGG
GCGGCCAAGA GCTCCATCCC CATCCTGATC ACCGGCGAGA GCGGGGTCGG CAAGGAGCTG
ATCGCCCGCG CCGTGCACGG CGGCTCGGAT CGGGCCGGCA AGCCGTTCGT AGCCGTCAAC
TGCGGCGCGA TCCCAGAGAA CCTCGTCGAG TCGATCCTGT TCGGCCACGA GAAGGGCAGC
TTCACCGGCG CGACCGACAA GCACCTGGGC AAGTTCAAGG AGGCCGACGG CGGCACCCTG
TTCCTCGACG AGGTCGGCGA ACTGCCGCTC GACATGCAGG TCAAGCTGCT GCGCGCGCTG
CAGGAAGGCG AGATCGATCC GGTCGGCTCC AAGCGCTCGC AGAAGGTGGA CGTGCGCATC
GTCTCGGCCA CCAATCGCGA CGTCGCCCAC GCCGTCGAGC AGGGCCGGTT CCGCGAGGAC
CTCTATTACC GCCTGAACGT CTTCCCGATC GAGGCCCCGT CCCTGCGCGA ACGGCGCGAG
GACATCCCGG CCCTGGTCGA GGCCTTCATC CGCCGCTTCA ACGTCGAAGA AGGCAAGCGG
GTGGTCGGCG CGACGCCGGA GACGCTGAAG ATCCTGTCGG TCTTCGACTG GCCCGGCAAC
GTGCGCCAGC TGGAGAACGC GGTCTATCGC GCCATCATCC TAGCCGACGC CCCCTATCTG
CAGCCCTACG ACTTCCCGGC GGTTTCAGGA ATCATGGCCC CGCCGCCCGA AGCGCTGGCG
GCGGTGCAAC CCGACCTGCC GGCCGTGCTG CAGGCCGCCC ACGCCGTCAT GGCCCGCTCG
CCGAACATGG ATTCGCCGGT GCGCATCCTC GACGACCGCG GTCACCTGAG GACCCTGGAA
GAGATCGAGC GCGACCTGAT CCAGCACGCC ATCGAGGTCT ATGCCGGCCA CATGAGCGAG
GTCGCCCGCC GCCTGGGCAT CGGCCGCTCG ACCCTCTATC GCAAGGTCCG CGAGCAGGGC
ATCGAGATCG ACCTGAAGGA AGCCTCGTGA
 
Protein sequence
MTKTVLVVDD DPTQRRLIQA VLERDGFAVS HAENGDAAMA HLASGAPVDV VLLDLVMPGL 
SGQDTLKEMR ARGFAQPVIV LTASGGVDTV VRAMQAGATD FFIKPASPER ITVSIRNALS
MGDLKGEVER LTKRTNNRTT FADLIGASPA MTLVKRMGER AAKSSIPILI TGESGVGKEL
IARAVHGGSD RAGKPFVAVN CGAIPENLVE SILFGHEKGS FTGATDKHLG KFKEADGGTL
FLDEVGELPL DMQVKLLRAL QEGEIDPVGS KRSQKVDVRI VSATNRDVAH AVEQGRFRED
LYYRLNVFPI EAPSLRERRE DIPALVEAFI RRFNVEEGKR VVGATPETLK ILSVFDWPGN
VRQLENAVYR AIILADAPYL QPYDFPAVSG IMAPPPEALA AVQPDLPAVL QAAHAVMARS
PNMDSPVRIL DDRGHLRTLE EIERDLIQHA IEVYAGHMSE VARRLGIGRS TLYRKVREQG
IEIDLKEAS