Gene Caul_0813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0813 
Symbol 
ID5898268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp868936 
End bp871014 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content66% 
IMG OID641561294 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding 
Protein accessionYP_001682442 
Protein GI167644779 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.144447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGA TCAACAACGT CACGGATCTG ACCGTCGAAG GCGACATCGG GGTCGTCACG 
CTCAACTCGC CGCCGGTCAA CGCCTTGTCG GCCGCCGTGC GCGAAGGCCT TAAGGGCGCG
TTCGACGCCG CCATCGCCGA CCCCGCCGTC AGGGCCATCG TGCTGATCTG CGAGGGCAAG
ACCTTCATCG CCGGCGCCGA CATCACCGAG TTCGGCAAGG CCATGACCGG ACCGTCCTTG
CAGGACGTGC AGAACACCAT CGAAAACTCG CCCAAGCCGG TGATCGCGGC CATCCACGGC
ACCGTGCTGG GCGGCGGGCT GGAGGTGGCG CTGGTCGCGC ACTTCCGCGT CGCCGTGCCC
TCGGCCAAGG CCGGCCTGCC GGAGGTCAAT ATCGGCCTGC TGCCAGGCGC CGGCGGCACC
CAGCGCCTGC CGCGCGTCGT GGGCGTCGAG AAGGCGCTCG AGATGGTCAC CACCGGCCAG
CACGTGCCGG CGAAAGCCGC TCTCGCGATG GGCCTGTTCG ACAGCCTAGT CGAGGAAGGG
GCCCTGCGCG ACGGGGCCAT CGCCTTCGCC CGCGTGGTGC TGGCCGAGGA CAAGCCCCTG
ACCCGCATCC GCGACCAGAA CGCCAAGGTC GAGGCCGCGC GCGGCAAGCC CGAGATCTTC
AGCGAGTTCC GAGCGGCCAA CGCCCGCAAG TTCCGCGGCT TCCTGGCCCC GGAGAACAAC
ATCAAGTGCA TCGAGGCGGC GGTGAACCTG CCTTTCGACG AGGGGTTGAA GGAAGAGCGG
CGGCTGTTCA TGGAGCTGAT GACCGGCACG CAGTCGGCCG CCCAGCGCCA TGTGTTCTTC
GCCGAACGCC AGGCGGCCAA GATCCCCGAT GTGCCGGACG ACACCCCCAT CATTCCGGTC
AAGAAGGTCG GCGTGATCGG GGCCGGCACC ATGGGCGGCG GCATCTCGAT GAACTTCCTC
AACGCCGGCA TCCCGGTGAC GATCATCGAG GCCAAGCAAG AGAATCTGGA TCGCGGCGTC
GGGGTGATCC GCAAAAACTA CGAGAACACC GCCAAGAAGG GCCGCCTGAC CCAGGACGAC
GTCGAAAAGC GCATGGCGCT GCTGACGCCC TCGATGCATC TGGAAGACTT GACCGATTGC
GACCTGATGA TCGAGGCCGT GTTCGAGCTG ATGGAGATCA AGAAGGAGGT GTTCGGCAAG
CTGGACACCA TCGCCAAGCC CGGCGCGATC CTAGCCTCCA ACACCTCCTA CCTCGACCTC
GACGTGATCG CCGCCAGCAC CAGCCGGCCG CAGAGCGTGA TCGGCCTGCA CTTCTTCTCG
CCGGCCAATG TGATGAAGCT GCTGGAGATC GTGCGGGGGG CCAAGACCGA CAAGTCGGTG
ATCGCCACCG CGATGCGGAT CGGCAAGACG ATCGGCAAGG TCGCGGTGCT GGTCGGCAAC
TGCCACGGCT TCGTCGGCAA CCGCATGCTG GCCCAGCGCC AGCGCGAGGC CCAGAAACTG
ATCCTGGAAG GGGCCATGCC CTGGGATGTC GACCGCGTGC TCTACGATTT TGGCCTGCCC
ATGGGGCCGT TCGCCATGAG CGACCTGGCC GGCCTCGACA TCGGCTGGGA CTCGACGAAG
TCGAGCTCGT CCACCGTCCG CGAAGTGCTG TGCGAGATGG ACCGGCGCGG CCAGAAGAAC
GGCAAGGGCT TCTACGACTA CGACGAGAAC CGCGTCGCCA AGCCGTCGAA AGAGGTCGAG
CAAGTGATCC TCGACTTCGC CGAGAAGCGC CAGATCCAGC GCCGCGAGAT CAGCGACCAG
GAGATCCTGG AACGCTGCCT GTATCCGATG GTCAACGAGG GGGCCAAGAT CCTGGAAGAG
GGCAAGGCCA TCCGGGCGTC GGACATCGAT ACCGTCTGGA TCAACGGCTA CGGCTGGCCG
GTCTATACCG GCGGCCCGAT GTTCTGGGGC GAACTGGTCG GCCTGGACAA GGTGCTGGCC
AAGATGAAGG CGTTCCAGGC CGAACTCGGC GACGACTTTA AGCCCTCGGC CCTGCTCGAA
CGGCTGGTGG CCGAGGGCAA GGGCTTCAAG GACGCCTGA
 
Protein sequence
MAAINNVTDL TVEGDIGVVT LNSPPVNALS AAVREGLKGA FDAAIADPAV RAIVLICEGK 
TFIAGADITE FGKAMTGPSL QDVQNTIENS PKPVIAAIHG TVLGGGLEVA LVAHFRVAVP
SAKAGLPEVN IGLLPGAGGT QRLPRVVGVE KALEMVTTGQ HVPAKAALAM GLFDSLVEEG
ALRDGAIAFA RVVLAEDKPL TRIRDQNAKV EAARGKPEIF SEFRAANARK FRGFLAPENN
IKCIEAAVNL PFDEGLKEER RLFMELMTGT QSAAQRHVFF AERQAAKIPD VPDDTPIIPV
KKVGVIGAGT MGGGISMNFL NAGIPVTIIE AKQENLDRGV GVIRKNYENT AKKGRLTQDD
VEKRMALLTP SMHLEDLTDC DLMIEAVFEL MEIKKEVFGK LDTIAKPGAI LASNTSYLDL
DVIAASTSRP QSVIGLHFFS PANVMKLLEI VRGAKTDKSV IATAMRIGKT IGKVAVLVGN
CHGFVGNRML AQRQREAQKL ILEGAMPWDV DRVLYDFGLP MGPFAMSDLA GLDIGWDSTK
SSSSTVREVL CEMDRRGQKN GKGFYDYDEN RVAKPSKEVE QVILDFAEKR QIQRREISDQ
EILERCLYPM VNEGAKILEE GKAIRASDID TVWINGYGWP VYTGGPMFWG ELVGLDKVLA
KMKAFQAELG DDFKPSALLE RLVAEGKGFK DA