Gene Caul_0811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0811 
Symbol 
ID5898266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp865009 
End bp866994 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content71% 
IMG OID641561292 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_001682440 
Protein GI167644777 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGC ACTTGCGTGA CAAGACGCCC GCGGGACCGC ATGGGGGGCT CACCGGCTCC 
ACCATCGAGC GCGCCGCCGC CGACTGGTTC TTCGAGAGCA GCCTCGACAT GTTCGTGGTG
CTGGAGAACG ACGTGATCGT CCGTGTCAAT CCGGCCTGGA CCCTGCTGAC CGGCTGGACG
CCCGAGGAGA CCCTGGGCCG CCCGATCCGC GACTTCTTCC ACCTGCACGA CACCGACACC
ATCCTCGGCA TCGGCGAGGC CCTGCGCGCC CAGGGCGAGG CCCGCTCCGA GCACCGCCTG
GCCCGCAAGA CCGGCGGCTG GCTGTGGGTG CGCTCGCAAA CCAAGCTGCT GGCCGGACTA
TCGGACGGCA ACGCGCTGCT GATCGTCTTC CAGGACTTCA CGGAGGACCG CACCCGGCGA
ATCGAGCGCC AGCAGTCCGA GCGCGCCAAC GAGCTGCTGC GGACCGCGGC GGGCGTCTAT
GTCTGGCGCT TCGACCCGCG CAAGGGGGTC TACGTCTTCG AGCAGGACAT CCCCACGCCA
TCCTCGCCCC AGGGCGGGGT GCGGGTGATG ACGATCGACG AGATGACCGC CTCGATCCAT
GGCGAGGACC GCCAGCGCGT CTGGGAAGCC TTCAGCCAGA CCATCGCCCA GGGCGACCAC
CAGATGCTGA CCTATCGCTA CCTGGATCCA GCCAACCAGA CCTGGGTGTG GATGCGGGCC
GCCTGGCGCG GGGTGCGCGG GGCCAGCGCC AAGGCCTGGG ACGTGATCGG CATCAGCCAG
GACGTCACCG AGCTGGTCGC CGCCCGCGAC GCCGCGCTCG GGGCCGCCGA CGCCAAGGCC
CAGTTCCTGG CCAATATGAG CCACGAGATC CGCACCCCGA TGAACGGCGT GCTGGGCGTC
ATGCACCTGC TCAAGCGCGA GAAGCTGTCG GCGGACGGCC GCCAACTGTT GACCGAGGCC
TTGGGCTGCG GGGCCATGCT GTCGGAACTG CTCAACGACA TCATCGATTT CTCGAAGATC
GAGGCGGGCA AACTGGAGCA CCATCCCGAG CCGATCGATC CGGCCGCCCT GCTGCGCAAC
GTTGCCGACC TGCTGCGGCC CCAGGCCCGG CAGAAGGGCC TGACCCTGAC GGTCACGGTC
GATCCCGACA TCGGCTGGGT CGCCGCCGAC CCCCTGCGGC TGCGCCAGGG CCTGTTCAAC
CTGCTGGGCA ACGCCGTGAA GTTCACCCTT GAGGGCGGCG TTCACGCGCG GCTGACCACC
GCTGGCGCGC CGGGCGAACC CCGCCTGCGT TTCGAGATCC AGGACACCGG CGTGGGCATC
GACCAGACCG CCGCCGACGG CCTGTTCCAG CGCTTCAGCC AGGCCGACGG CTCGACCACC
CGCCGCTTCG GCGGCGCCGG CCTGGGCCTG GCCATCACGC GCCGCCTGGC CATCCTGATG
GGCGGCGATG TCGGCTTTCG CAGCCCTCCG GAAGGCGGCT CGCTGTTCTG GCTGGAGATC
GCGGCCCCGC CGGCCTCCGA GGCCGCCGCT CCCGACGAGG CCGCCGACAC CGCCCTGCTG
GCCGATCTGC GCGTGCTGAT CGTCGAGGAC AACGTCACCA ACCGCCTGAT CGCCGGCCGC
CTGCTGCAGG CCATGGGCGC CGTGGTCGAG ATCGCCGAGG ACGGAATCCT GGGCGTGGAG
GCCGTCAGCC TCGAACGCGA CGGGCGAGGC TTCGACCTGA TCTTCATGGA TATCCAGATG
CCCGGTATCG ACGGCGTCGA AGCCGCCCGG CGCATCCGCG ACCTGGGCGG CGCGGCGGCG
CGAACCCCGA TCATCGCCAT GACCGCCAAC GCCATGGCCC ACCAGCAGGC GGCCTATCTG
GCCGCCGGCA TGAACGGCGC GGTGGCCAAG CCCCTGTCGC CCGCCGCCCT GGTCCAGGCT
ATCGCGACCG TGCTCGCCCA GGACCCCGAA GCGCACGCCA AGCCGGCGCG GCGCCGGTCC
GCGTGA
 
Protein sequence
MGKHLRDKTP AGPHGGLTGS TIERAAADWF FESSLDMFVV LENDVIVRVN PAWTLLTGWT 
PEETLGRPIR DFFHLHDTDT ILGIGEALRA QGEARSEHRL ARKTGGWLWV RSQTKLLAGL
SDGNALLIVF QDFTEDRTRR IERQQSERAN ELLRTAAGVY VWRFDPRKGV YVFEQDIPTP
SSPQGGVRVM TIDEMTASIH GEDRQRVWEA FSQTIAQGDH QMLTYRYLDP ANQTWVWMRA
AWRGVRGASA KAWDVIGISQ DVTELVAARD AALGAADAKA QFLANMSHEI RTPMNGVLGV
MHLLKREKLS ADGRQLLTEA LGCGAMLSEL LNDIIDFSKI EAGKLEHHPE PIDPAALLRN
VADLLRPQAR QKGLTLTVTV DPDIGWVAAD PLRLRQGLFN LLGNAVKFTL EGGVHARLTT
AGAPGEPRLR FEIQDTGVGI DQTAADGLFQ RFSQADGSTT RRFGGAGLGL AITRRLAILM
GGDVGFRSPP EGGSLFWLEI AAPPASEAAA PDEAADTALL ADLRVLIVED NVTNRLIAGR
LLQAMGAVVE IAEDGILGVE AVSLERDGRG FDLIFMDIQM PGIDGVEAAR RIRDLGGAAA
RTPIIAMTAN AMAHQQAAYL AAGMNGAVAK PLSPAALVQA IATVLAQDPE AHAKPARRRS
A