| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0795 |
|---|
| Symbol | |
|---|
| ID | 5898250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 842919 |
|---|
| End bp | 847103 |
|---|
| Gene Length | 4185 bp |
|---|
| Protein Length | 1394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641561276 |
|---|
| Product | DNA-directed RNA polymerase subunit beta' |
|---|
| Protein accession | YP_001682424 |
|---|
| Protein GI | 167644761 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
|---|
| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.448207 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.385638 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGG AAGTCCTGAA CATCTTCAAT CCGGTCCAGG CCGCTCCGAC CTTCGACCAG
ATCCGCATCT CGCTGGCCTC GCCGGAAAAG ATCCGCTCGT GGTCGTTCGG CGAGATCAAG
AAGCCGGAAA CCATCAACTA TCGCACGTTC AAGCCCGAGC GTGACGGCCT GTTCTGCGCC
CGTATCTTTG GCCCGACCAA GGACTACGAA TGCCTGTGCG GCAAGTACAA GCGCATGAAG
TACAAGGGCA TCATCTGCGA AAAGTGCGGT GTCGAAGTCA CCCTGGCCCG CGTCCGTCGC
GAGCGCATGG GTCACATCGA GCTGGCCTCG CCGGTCGCCC ACATCTGGTT CCTGAAGAGC
TTGCCTTCGC GCATCGCCAT GATGCTCGAC ATGCCGCTGA AGGACATCGA GCGGGTCCTG
TACTTCGAAT ACTACATCGT CACCGAGCCG GGCCTGACCC CGCTGAAGCA GCACCAGCTG
CTCAGCGAGG ACGACTTCAT GCGCGCCCAG GACGAGTACG GCGATGACAG CTTCACCGCC
GAGATCGGCG CCGAAGCCAT CCAGAACCTG CTCAAGGCGA TCGACCTCGA CAAGGAAGCC
GAACGCCTGC GCGAAGAGCT GGCCGGCACC GTGTCGGACA TGAAGCAGAA GAAGTTCAGC
AAGCGCCTGA AGATCCTCGA AGCCTTCTCC GAGTCGGGCA ACCGCCCGGA GTGGATGGTG
TTGACGGTCG TGCCGGTGAT CCCGCCGGAA CTGCGCCCGC TGGTGCCGCT GGACGGCGGC
CGCTTCGCCA CGTCCGACCT GAACGACCTC TATCGCCGGG TCATCAACCG TAACAACCGC
CTCAAGCGCC TGATCGAGCT GCGCGCGCCC GACATCATCA TCCGCAACGA AAAGCGGATG
CTGCAGGAGT CGGTCGACGC CCTGTTCGAC AACGGCCGTC GCGGTCGCGT CATCACCGGC
GCCAACAAGC GTCCGCTGAA GTCGCTGGCC GACATGCTGA AGGGCAAGCA AGGCCGCTTC
CGCCAGAACC TGCTGGGCAA GCGCGTCGAC TATTCGGGCC GCTCGGTCAT CGTCGTGGGT
CCGGACCTGA AGCTGCACGA GTGCGGCCTG CCCAAGAAGA TGGCTCTGGA GCTGTTCAAG
CCGTTCATCT ATGCGCGCCT GGACGCCAAG GGCCTGTCGG GCACCGTCAA GCAGTCCAAG
CGCATGGTCG AGCGCGAGCA GCCCCAGGTG TGGGACATCC TCGAAGAGGT GATCCGCGAA
CACCCGGTGA TGCTGAACCG CGCGCCGACG CTTCACCGTC TGGGCATCCA GGCGTTCGAA
CCCAAGCTGA TCGAGGGCAA GGCCATCCAG CTGCACCCGC TGGTCTGCGC CGCGTTCAAC
GCCGACTTCG ACGGCGACCA GATGGCTGTC CACGTGCCGC TGTCGCTGGA GGCGCAACTC
GAAGCGCGCG TCCTGATGAT GTCGACGAAC AACATCCTGT CGCCCGCCAA CGGTCGCCCG
ATCATCGTGC CGTCGCAGGA CATCGTCCTG GGCCTGTACT ACCTGTCGGT GGCTCGCGAA
GGTGAACCGG GTGAAGGCAA GATCTTCGCC GACCTGGGCG AAATCGAAGC CGCCATGGAC
GCCGGCGTCG TCAGCCTGCA CGCCAAGATC AAGTCGCGCT TCACGGAAAT GGACGCCGAC
GGCGTCGTCC GTCGCCGGGT GATCGACACC ACGCCGGGCC GGATGAAGAT CGCCGCCCTT
CTGCCCCAGC ACACCGCGAT CGGTCACCGA CTGATCGAGA AGGCGCTGAC CAAGAAGGAA
ATCGGCAATC TGATCGACGT CGTCTACCGC CACTGCGGCC AGAAGGCGAC GGTGATCTTC
GCCGACCAGA TCATGGGTCT GGGCTTCAAG GAAGCGGCCA AGGCCGGCAT CTCCTTCGGC
AAGGACGACA TCATCATCCC GAAGCGGAAG GAGGCGATCG TCGCCGAAAC CCGCACCCTG
GCCGAGGAGT ACGAGCAACA GTACGCCGAC GGCCTGATCA CCAAGGGCGA GAAGTACAAC
AAGGTCGTTG ACGCCTGGGC CAAGGCCACC GACCGCGTCG CCGACGAGAT GATGGCCGAG
CTTCAGATGA AGCATAAGGA CGAGAACGGC CGCGAGAAGG AAATCAACGC CATCTACATG
ATGGCCCACT CCGGCGCCCG GGGTTCGCAA GCCCAGATGA AGCAACTGGG CGGGATGCGC
GGCCTGATGG CCAAGCCTTC GGGCGAGATC ATCGAGACCC CGATCGTCTC GAACTTCAAG
GAAGGCCTGA CCGTTCAGGA ATACTTCAAC TCGACCCACG GCGCCCGCAA GGGCCTGGCG
GACACCGCGC TGAAGACCGC CAACTCCGGC TACCTGACCC GTCGTCTGGT CGACGTCGCG
CAGGACTGCA TCATCGTCGA GGAAGACTGC GGCACCACGC GGGGCATCAC CCTGCGCGCC
GTGGTCGAGG GCGGCGACGT GCTGGTCTCG CTGGGCGCCC GCGTCCTGGG CCGTTTCTCG
GCCGAGGACA TCAAGGACCC GGCGACCGGC GAGATCGTGG TTCCGGCCGA CACCTATCTG
ACCGAGAACA TGGCCGACCT CATTGAGGCC GCCGCCGTTC AATCGGTCAA GGTTCGCTCG
GTCCTGACCT GCGAAGCCAA GATCGGCGTC TGCGGCGCCT GCTACGGCCG CGACCTGGCC
CGGGGCACCC CGGTCAACAT CGGTGAAGCG GTCGGCGTCA TCGCCGCCCA ATCCATCGGC
GAGCCCGGCA CCCAGCTGAC GATGCGGACC TTCCACATCG GCGGCACCGC CCAGGTGGCC
GAGCAGTCGT TCTTCGAAAG CAGCAACGAC GGCACGGTCC GCGTGACCGG CGCCACCGTT
GTCGGCACCG ACGGCTTCCT GGTGGTCATG AGCCGCAACA CGGCCGTGAG CGTCCTGGTC
GACGGCAAGG AACGCGAAAA CTACAAGCCG CCGTACGGCG CGCGTCTGAA GATCAAGGAC
GGCGACAAGG TGAAGCGTGG CCAGCGTTTG GCCGATTGGG ACCCCTACAC CACCCCGATC
ATCACCGAAG TGGCCGGCAA GATCCGTGCG GAAGACCTGG TGGACGGCTT CTCCGTCCGC
GAGGAAACCG ACGAAGCCAC CGGCATCGCG CAACGCGTGA TCGCCGACTG GCGGACCTCG
GCACGCGCTT CGGACCTGCG TCCCGCCATG GGCGTTCTGG CCGAAGACGG CTCGTATGTT
CGCTTGGCCA ACGGCGGCGA GGCGCGCTAC CTGATGTCGG TCGGGGCCAT TCTGTCCGTC
GGTGACGGCG ACATGGTCAA GCCGGGCGAG GTCATCGCGC GGATCCCCAC CGAAGGCGCC
AAGACCCGGG ACATCACCGG TGGTCTGCCG CGCGTCGCCG AACTCTTCGA AGCCCGCCGT
CCCAAGGACT GCGCGGTCAT CGCGGAAATG GACGGCCGTG TCGAATTCGG CAAGGATTAC
AAGAACAAGC GCCGCATCAA GATCACCCCG GAAGTCGACG CTGACGGCAA CCAGGGCGAA
CCGGTCGAGT TCCTGATCCC CAAGGGCAAG CACATCGCGG TGCACGATGG CGATTTCATC
GCGCGCGGCG AATACATCAT CGACGGCAAC CCGGATCCGC ACGACATCCT GCGCATCCTG
GGCGTCGAGG CCCTGGCCAA CTTCCTCGTG GACGAGATCC AGGAGGTCTA TCGATTGCAG
GGCGTGCCGA TCAACGACAA GCACATCGAG ACGATCGTTC GTCAGATGCT GCAAAAGGTC
GAGATCCTGG AGCCGGGCGA CACGGGTCTG ATCAAGGGCG ATCACCTCGA CAAGCCCGAG
TTCTACGTCG AGCAGGACCG CGCGGTCGCG CGTGGCGGCC GTCCGGCCAC CACCCAGCCC
GTGCTGCTCG GCATCACCAA GGCGAGCTTG CAGACCAAGA GCTTCATCTC GGCCGCGTCG
TTCCAGGAAA CGACCCGCGT CCTGACCGAA GCCTCGGTGC ACGGCAAGAC CGACACCCTG
GAAGGCCTGA AGGAAAACGT CATCGTGGGT CGCCTGATCC CCGCCGGTAC GGGTTCCTAC
CTGCGCAGCC TGCAGCGCGT CGCCGCCAAG CGCGACGAGC AGCTGGCCCA GCAGCGCGAA
GATGCGATGG AGCCGCTGCC CGCGGTCATC GCCGAAGAAG CGTAA
|
|---|
| Protein sequence | MNQEVLNIFN PVQAAPTFDQ IRISLASPEK IRSWSFGEIK KPETINYRTF KPERDGLFCA
RIFGPTKDYE CLCGKYKRMK YKGIICEKCG VEVTLARVRR ERMGHIELAS PVAHIWFLKS
LPSRIAMMLD MPLKDIERVL YFEYYIVTEP GLTPLKQHQL LSEDDFMRAQ DEYGDDSFTA
EIGAEAIQNL LKAIDLDKEA ERLREELAGT VSDMKQKKFS KRLKILEAFS ESGNRPEWMV
LTVVPVIPPE LRPLVPLDGG RFATSDLNDL YRRVINRNNR LKRLIELRAP DIIIRNEKRM
LQESVDALFD NGRRGRVITG ANKRPLKSLA DMLKGKQGRF RQNLLGKRVD YSGRSVIVVG
PDLKLHECGL PKKMALELFK PFIYARLDAK GLSGTVKQSK RMVEREQPQV WDILEEVIRE
HPVMLNRAPT LHRLGIQAFE PKLIEGKAIQ LHPLVCAAFN ADFDGDQMAV HVPLSLEAQL
EARVLMMSTN NILSPANGRP IIVPSQDIVL GLYYLSVARE GEPGEGKIFA DLGEIEAAMD
AGVVSLHAKI KSRFTEMDAD GVVRRRVIDT TPGRMKIAAL LPQHTAIGHR LIEKALTKKE
IGNLIDVVYR HCGQKATVIF ADQIMGLGFK EAAKAGISFG KDDIIIPKRK EAIVAETRTL
AEEYEQQYAD GLITKGEKYN KVVDAWAKAT DRVADEMMAE LQMKHKDENG REKEINAIYM
MAHSGARGSQ AQMKQLGGMR GLMAKPSGEI IETPIVSNFK EGLTVQEYFN STHGARKGLA
DTALKTANSG YLTRRLVDVA QDCIIVEEDC GTTRGITLRA VVEGGDVLVS LGARVLGRFS
AEDIKDPATG EIVVPADTYL TENMADLIEA AAVQSVKVRS VLTCEAKIGV CGACYGRDLA
RGTPVNIGEA VGVIAAQSIG EPGTQLTMRT FHIGGTAQVA EQSFFESSND GTVRVTGATV
VGTDGFLVVM SRNTAVSVLV DGKERENYKP PYGARLKIKD GDKVKRGQRL ADWDPYTTPI
ITEVAGKIRA EDLVDGFSVR EETDEATGIA QRVIADWRTS ARASDLRPAM GVLAEDGSYV
RLANGGEARY LMSVGAILSV GDGDMVKPGE VIARIPTEGA KTRDITGGLP RVAELFEARR
PKDCAVIAEM DGRVEFGKDY KNKRRIKITP EVDADGNQGE PVEFLIPKGK HIAVHDGDFI
ARGEYIIDGN PDPHDILRIL GVEALANFLV DEIQEVYRLQ GVPINDKHIE TIVRQMLQKV
EILEPGDTGL IKGDHLDKPE FYVEQDRAVA RGGRPATTQP VLLGITKASL QTKSFISAAS
FQETTRVLTE ASVHGKTDTL EGLKENVIVG RLIPAGTGSY LRSLQRVAAK RDEQLAQQRE
DAMEPLPAVI AEEA
|
|---|
| |