Gene Caul_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0792 
Symbol 
ID5898247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp837411 
End bp838085 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID641561273 
Productdiguanylate phosphodiesterase 
Protein accessionYP_001682421 
Protein GI167644758 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.307783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA AGATCAGCTG CAGCGGTTGC CGCGACGGCG CTGGGTTTGA TCTGCCGATC 
ACCATGGCGT TCCAACCCAT CCTGGATTGC GGCGCTGGAA CGGTGTTCGC GCACGAGGCC
CTGGTGCGCG GCGCGGCCGG CGAAGGCGCC GGCCTTGTCC TGGCTCAGGT TTCCGAAGCC
AACCGCTACG CCTTCGACCA GCAATGCCGG GTCAGGGCGA TCGAGCAGGC CGCCGCCCTG
GGTCTCGCCG CCGATGGAGC CAATCTGTCG ATCAACTTTC TGCCCAACGC TGTCTACGAG
CCCCGCGCCT GCATCCGCCT CACCCTGGCG GCGGCGATGC GGACCGGCTT TCCGATCAAT
CGCATCATCT TCGAATTCAC CGAGGTCGAG CGGCTCGATA CCGACCACAT CCTCAACATC
CTGCGCACCT ATCGGGCGAT GGGCTTCCAG ACCGCGATCG ACGACTTCGG CGCGGGTTAC
GCCGGACTTG GCCTGCTGTC GAAATTCCAG CCCGACATCG TCAAGCTCGA CATGGACCTG
ATCCGCGACA TCGACACCAG CACGGTCAAG CAGGCCATTG TCGGCTCGAC CCTGCGCATG
CTGCGTGACC TGGGCGTGAC CCCGCTCTGC GAAGGCGTCG AGACCTTGGG TGAGTACGAG
TTCCTGCGCG GTTGA
 
Protein sequence
MTAKISCSGC RDGAGFDLPI TMAFQPILDC GAGTVFAHEA LVRGAAGEGA GLVLAQVSEA 
NRYAFDQQCR VRAIEQAAAL GLAADGANLS INFLPNAVYE PRACIRLTLA AAMRTGFPIN
RIIFEFTEVE RLDTDHILNI LRTYRAMGFQ TAIDDFGAGY AGLGLLSKFQ PDIVKLDMDL
IRDIDTSTVK QAIVGSTLRM LRDLGVTPLC EGVETLGEYE FLRG