Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0792 |
Symbol | |
ID | 5898247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 837411 |
End bp | 838085 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641561273 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_001682421 |
Protein GI | 167644758 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.307783 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCA AGATCAGCTG CAGCGGTTGC CGCGACGGCG CTGGGTTTGA TCTGCCGATC ACCATGGCGT TCCAACCCAT CCTGGATTGC GGCGCTGGAA CGGTGTTCGC GCACGAGGCC CTGGTGCGCG GCGCGGCCGG CGAAGGCGCC GGCCTTGTCC TGGCTCAGGT TTCCGAAGCC AACCGCTACG CCTTCGACCA GCAATGCCGG GTCAGGGCGA TCGAGCAGGC CGCCGCCCTG GGTCTCGCCG CCGATGGAGC CAATCTGTCG ATCAACTTTC TGCCCAACGC TGTCTACGAG CCCCGCGCCT GCATCCGCCT CACCCTGGCG GCGGCGATGC GGACCGGCTT TCCGATCAAT CGCATCATCT TCGAATTCAC CGAGGTCGAG CGGCTCGATA CCGACCACAT CCTCAACATC CTGCGCACCT ATCGGGCGAT GGGCTTCCAG ACCGCGATCG ACGACTTCGG CGCGGGTTAC GCCGGACTTG GCCTGCTGTC GAAATTCCAG CCCGACATCG TCAAGCTCGA CATGGACCTG ATCCGCGACA TCGACACCAG CACGGTCAAG CAGGCCATTG TCGGCTCGAC CCTGCGCATG CTGCGTGACC TGGGCGTGAC CCCGCTCTGC GAAGGCGTCG AGACCTTGGG TGAGTACGAG TTCCTGCGCG GTTGA
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Protein sequence | MTAKISCSGC RDGAGFDLPI TMAFQPILDC GAGTVFAHEA LVRGAAGEGA GLVLAQVSEA NRYAFDQQCR VRAIEQAAAL GLAADGANLS INFLPNAVYE PRACIRLTLA AAMRTGFPIN RIIFEFTEVE RLDTDHILNI LRTYRAMGFQ TAIDDFGAGY AGLGLLSKFQ PDIVKLDMDL IRDIDTSTVK QAIVGSTLRM LRDLGVTPLC EGVETLGEYE FLRG
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