Gene Caul_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0786 
SymbolruvB 
ID5898241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp832044 
End bp833090 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content71% 
IMG OID641561267 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_001682415 
Protein GI167644752 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.756358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.239148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGA TCATTTCGGG AGAAGCTCAA CAAGGCGAAC AGATCCCCGG CGCCAGCGAC 
CGCGCCCTGC GGCCGCAAAC CCTCGCCGAG TTCGTCGGCC AGGAGCAGGC CAAGGCCAAT
CTGCGCATCT TCATCGAGGC GGCCAAGGGC CGGGGCGAGG CCCTGGACCA TGTGCTGCTG
TTTGGCCCGC CGGGCCTGGG CAAGACCACC CTGGCCCAGA TCGTGGCCCG CGAACTGGGC
GTCAACTTCC GCGCCACCTC AGGCCCGGTG CTCAACAAGG CCGGCGACCT GGCGGCGATC
CTGACCAATC TGGAAGCCAA CGACGTCCTG TTCATCGACG AGATCCACCG CCTGCCCTCG
ACCGTGGAGG AGATCCTCTA TCCGGCCATG GAGGACCACG TGCTGGACCT GGTGATCGGC
GAGGGACCCT CGGCGCGGTC GATCCGCATC GATCTGGCCC CCTTCACCCT GGTGGCGGCG
ACCACGCGGG CGGGCATGCT GGCGACGCCG CTGCGCGACC GCTTCGGCAT CCCGATCCGG
CTGGAATTCT ATACCCCCAA GGAGCTGCAG CACGTGTTGC TGGGCGCGGC CCGCAAGATG
GGCGCGCCGC TCAACGAGGA CGGCGCGGCC GAAATCGCCG CGCGGGCTCG CGGCACGCCG
CGCGTCGCCG GCCGCCTGCT GCGCCGGGTC CGCGACTTCG CCTCGGCCGA CGGCGCCTCA
GTGATCGACC GCAAGGCGGC GGGCATGGCC CTGGCGCGGC TGGAAGTGGA CGAGCTCGGC
TTGGACAGCC TCGACCGCCG CTACCTGCGC GCCCTGATCG AGAACTACGG CGGCGGTCCG
GCCGGCGTCG AGACCCTGGC CTACGCCATC GCCGAGGCCC GCGACGCGGT GGAAGACGTC
ATCGAGCCCT ACCTGATGCA GCAGGGCTTC ATCCAGCGTA CGCCGCGCGG GCGGATGGCG
TGTGGCAAGG CCTATCTGCA CCTGGGGCTG ACCGAGCCGG TCTCGGCGCC GAAGGCGGTG
CAGGGCGGCC TGTTCGGGGA GGACTGA
 
Protein sequence
MTRIISGEAQ QGEQIPGASD RALRPQTLAE FVGQEQAKAN LRIFIEAAKG RGEALDHVLL 
FGPPGLGKTT LAQIVARELG VNFRATSGPV LNKAGDLAAI LTNLEANDVL FIDEIHRLPS
TVEEILYPAM EDHVLDLVIG EGPSARSIRI DLAPFTLVAA TTRAGMLATP LRDRFGIPIR
LEFYTPKELQ HVLLGAARKM GAPLNEDGAA EIAARARGTP RVAGRLLRRV RDFASADGAS
VIDRKAAGMA LARLEVDELG LDSLDRRYLR ALIENYGGGP AGVETLAYAI AEARDAVEDV
IEPYLMQQGF IQRTPRGRMA CGKAYLHLGL TEPVSAPKAV QGGLFGED