Gene Caul_0762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0762 
Symbol 
ID5898216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp813798 
End bp814847 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content71% 
IMG OID641561242 
Productlysine--tRNA ligase 
Protein accessionYP_001682391 
Protein GI167644728 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00462] lysyl-tRNA synthetase-like protein GenX 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.756358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.385882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCG CTTCTCCATC GCCCTGGTGG CGGCCCGAAA GCCACGCCGA TCGGCGGCCG 
TTCCTGCTGG CCCGCAATCG GATCAAGGCG GCTTTCCGGG CCTGGTTCGA GGCCCGGGAC
TTCCTGGAGG TCGAGACCGC GGCCCTGCAG GTCTCGCCGG GCAACGAGGC CCATCTGCAC
GCCTTCGAGA CCGCCGCCCT GACGATCTCG GGCGAGCGCG CGCCGCTCTA CCTGCACACC
TCGCCCGAGT TTTCCTGCAA GAAGCTGCTG GCGGCGGGCG AGCGGAGGAT CTTCGATTTC
GGCAAGGTCT GGCGCAACCG CGAGCGGGGC GCGCTGCACC ATCCGGAGTT CACCATGTTG
GAATGGTACC GGGTGGATGC GCCCTACCAG ACCCTGATGG ACGACTGCGC GGCGCTGCTG
GCCCTGGCGG CCGAGACGGC GGGGACGCGG GAGTTCCGCT TTCGCGGCCG CTCGTGCGAT
CCCTTCGCCG CGCCAGAGCG GGTGACGGTG GCCCAGGCGT TCGAGCGTCA CGCCGGCGTC
GACCTGCTGG CCTCGATCGA CGGGGCGGGG GCCACAGACC GCGACGCCCT GGCCGCCTCT
GCGCGGGCCG CCGGGGTCCG GGTCGCCGCC GACGATACCT GGGCCGACGT GTTCAGCCGG
GTGATCGTCG AGAAGGTCGA GCCGAACCTC GGGATCGGCC GGGCGACCAT TCTCTGCGAG
TATCCGGTCG CCGAAGCGGC CCTGGCCCGG CCCAAGCCCG GCGATCCGCG CGTCGCCGAG
CGGTTCGAGC TCTATGCCTG CGGGGTGGAA CTGGCCAACG CCTTCGGCGA ACTGACCGAC
GCCGGAGAGC AGCGCCGCCG CTTCGAGGCC GAGATGGATG AGAAGGCCCG GGTCTATGGC
GAGCGCTACC CGCTGGACGA GGACTTCCTG GCGGCCCTGG CCATCATGCC CAACGCCTCG
GGCTCGGCCC TGGGCTTCGA CCGCCTGGTG ATGCTGGCGG CGGGGGCGAG CCGGGTGGAT
CAGGTGATGT GGACGCCGGT GGCGGGCTGA
 
Protein sequence
MQTASPSPWW RPESHADRRP FLLARNRIKA AFRAWFEARD FLEVETAALQ VSPGNEAHLH 
AFETAALTIS GERAPLYLHT SPEFSCKKLL AAGERRIFDF GKVWRNRERG ALHHPEFTML
EWYRVDAPYQ TLMDDCAALL ALAAETAGTR EFRFRGRSCD PFAAPERVTV AQAFERHAGV
DLLASIDGAG ATDRDALAAS ARAAGVRVAA DDTWADVFSR VIVEKVEPNL GIGRATILCE
YPVAEAALAR PKPGDPRVAE RFELYACGVE LANAFGELTD AGEQRRRFEA EMDEKARVYG
ERYPLDEDFL AALAIMPNAS GSALGFDRLV MLAAGASRVD QVMWTPVAG