| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0722 |
|---|
| Symbol | |
|---|
| ID | 5898177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 781269 |
|---|
| End bp | 781865 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641561204 |
|---|
| Product | shikimate kinase |
|---|
| Protein accession | YP_001682353 |
|---|
| Protein GI | 167644690 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.989492 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC ATCCCGCCCC TTTCCGCCCA GATCATGAGG GCACGGACCC CAGGGCCGCC
TTGCGCCACA AGACCATCGT CTTGGTGGGG CTGATGGGCG TGGGCAAGTC CAGCGTCGGC
CGCCGCCTGG CCACGGCGCT GGACCTGCCG TTCCGGGACG CCGACAACGA GGTCGAGGCC
GCCGCCGGGC GCTCCATCCC CGAAATCTTC GCCGAGATGG GCGAGCCGGC CTTCCGCGAC
GGCGAGCGGC GGGTGATCGC CCGGCTGCTG GAGGAGCCGC CTCACGTGCT GGCCACCGGC
GGCGGGGCCT TCGCCAATCC CGAGACCCGC GCCCTGATCA AGTCCAAGGC CATCGCCGTC
TGGCTGAAGG CCGACCTGGA GCTGCTGGCC CGCCGCGTCG GCCGCAAGGA AGGCCGGCCG
CTGCTCAAGG GCCGCGACCC GATCGCGGTG CTAAGCGAGC ACGCCCAGGC CCGCTACCCC
GCCTATGGCG AGGCCCACCT GACGGTCGAG ACCGGCGACA CCGCGCACGG CGTGGCCGTC
GAGGCGGTGA TCACCGCCCT GCAGAACTAT TTGAAGTCCG AAAGCGAGCC GAAGTGA
|
|---|
| Protein sequence | MTDHPAPFRP DHEGTDPRAA LRHKTIVLVG LMGVGKSSVG RRLATALDLP FRDADNEVEA
AAGRSIPEIF AEMGEPAFRD GERRVIARLL EEPPHVLATG GGAFANPETR ALIKSKAIAV
WLKADLELLA RRVGRKEGRP LLKGRDPIAV LSEHAQARYP AYGEAHLTVE TGDTAHGVAV
EAVITALQNY LKSESEPK
|
|---|
| |