Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0656 |
Symbol | |
ID | 5898111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 724414 |
End bp | 725391 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641561138 |
Product | pyridoxal-5'-phosphate-dependent protein beta subunit |
Protein accession | YP_001682287 |
Protein GI | 167644624 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.360995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.512739 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATCG CCCTCGCCGA CATCCAAGCC GCCGCCGCCC GCCTCTCGGA ACTGGCCGTC CGCACGCCGC TGATCGAGAG CCCCGCGCTC AACGACCGCC TCGGCGGCCG GATCCTGATC AAGCCCGAGA CCCTGCAGCG GGCGGGGGCC TTCAAGTTTC GCGGCGCCTA CAATCGCCTG TCCCAGCTAA ACGACGACGA GCGCCAGCGC GGGGTGGTGG CCTTCTCGTC GGGCAACCAC GCCCAGGGCG TGGCCCTGGC GGCCCAGCTT CTGGGCTGCC CGGCCCTGAT CGTCATGCCG TCCGACTCGC CCGCCGTGAA GGTCGAGGGC ACGCGCGGCT TCGGCGCCGA GATCCGCTTC TACGACCGCT TCACCGAGGA CCGCGTCGCC ATCGCCGACC AGATCGCCCG CGAGCGCGGC TGCGTGGTCG TGCCGTCCTA CGACGACCCG CACATCATCG CTGGCCAGGG CACGGTCGGG CTGGAGATCG TCGAGCAGGC CCGCGCCCTG GGCCTGGACC TGGACCGCGT GCTCAGCCCG GTCGGCGGCG GCGGGCTGAT CGCCGGCGTC TCCACGGCGG TCAAGGCGCT GTCGCCGGCG ACCGAGGTCT GGGGCGCGGA ACCCACCGGC TTCGACGAGA CCCGCCGTTC GTTGATCTCC GGCCAGCGCG AGACCATCGA TGAGGACGCC CGCTCGATCT GCGACGCCCT GCTGACCCCG ATCCCGGGCG AGCTGACCTG GCCGATCAAC AGCCGCAACC TTTCGGGCAT CGCAGCCGTG ACCGACACCG AGGTCGCCGA GGCCATGCGC TACGCGTTCG CCACCTTGAA GCTGGTGATC GAGCCCGGCG GCTGCGTGGC CCTGACCGCG GCCCTGACGG GGAAGATCGA CCTGAGGGGC CAGACGGCGG CGATCGTCTG TTCAGGCGGG AATGTGGATC CGGGGCTCTA TGCGAGGGTT CTAAACGGCG AAATTTGA
|
Protein sequence | MTIALADIQA AAARLSELAV RTPLIESPAL NDRLGGRILI KPETLQRAGA FKFRGAYNRL SQLNDDERQR GVVAFSSGNH AQGVALAAQL LGCPALIVMP SDSPAVKVEG TRGFGAEIRF YDRFTEDRVA IADQIARERG CVVVPSYDDP HIIAGQGTVG LEIVEQARAL GLDLDRVLSP VGGGGLIAGV STAVKALSPA TEVWGAEPTG FDETRRSLIS GQRETIDEDA RSICDALLTP IPGELTWPIN SRNLSGIAAV TDTEVAEAMR YAFATLKLVI EPGGCVALTA ALTGKIDLRG QTAAIVCSGG NVDPGLYARV LNGEI
|
| |