Gene Caul_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0627 
Symbol 
ID5898082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp694778 
End bp695941 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content70% 
IMG OID641561109 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001682258 
Protein GI167644595 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.260972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAC CCCTGGACGG CGTGCGCATC GTGGCGGTCG AGCAGTACGC CGCCGGCCCC 
TACGGCACCC AGTTGCTGTG CGAGCTGGGC GCGCAGGTGA TCAAGATCGA GGCCCCCTCC
CTGGGCGGCG ACATCAGCCG GGGCCTGGGT CCCTACTTCC TGGGCCCATC CGCCCCAGGG
GGCGGCGACA GCCAGTTCTT CCAGACCTTC TCGCGCGGCA AGCAGTCGGT GGCCCTGGAG
ATCAAGACGC CGGAGGGCCG CGCCGACTTC GAGCGACTGG CGGCCGGCGC CGACGCCGTG
GTCAACAACC TGCGCGGCGA CCAGCCGGGC AAGCTCCGCA TCACGTACGA CGATCTGAAG
GCCCTCAACC CCGCCCTCGT CTGCGCCCAT CTGTCCGCCT ACGGACGAGG CAACAGTCGC
GAGGCCTGGC CAGGCTACGA CTACCTGATG CAGGCCGAGG CCGGGTTCAT GACCCTGACC
GGCGAGCCGG ACGGACCGCC GGTGCGCTTT GGCCTGTCGA TGGTCGATTT CATGACCGGC
TCGGTGTTCG CGCTTGGGAT CGTCTCGGCG ATCCTCGGGG CGCGGGCCAG CGGTCAGGGT
TGCGACGTCG ACGTCTCGCT GTTCGACGTG GCCCTGCACC AGACCTCCTA TCCGGCGGTG
TGGGCGATGA ACGAGGGCTA TCAGGTCGGC CGCCCCCCGC GCGGCGCCCA CCCCTCGATC
AGCCCCTCGC AGCGGGTGAA GACGAAGGAC GGCTGGGGCA TGCTGATGTG CCAGACCCAG
CGGTTCTGGG AGGTTTGGTG CGACCTGGTC GGCCGGCCCG AGCTGAAGGC CGATCCGCGC
TTCCTCGACA TGCCGGCCCG TCGCGCCAAC CTCGACGCCC TGACCCCGAT CCTCGACGCG
ATCATGGAAA CCAAGACCGG CGGCGACTGG ATGGCCTATC TGGGCGGTCG CGTGCCGTTT
GCGCCGATCG CCGACCTGGC GCAGGCGCTG GACAACCCGT TCGTGGCGGA GGTGGCGATG
CGCGACCACG TCGATCACCC GGCCCGCCCC CAGGGCCTGG ACATGCTGGC CTGCCCGATC
AAGGTCGACG GCCGGCGCAT GCCCGCCGCC CGCGCCCCGG CGATGGGCGA GCACAACGAC
GTGTTGCTGG GACGGGACGC ATGA
 
Protein sequence
MNRPLDGVRI VAVEQYAAGP YGTQLLCELG AQVIKIEAPS LGGDISRGLG PYFLGPSAPG 
GGDSQFFQTF SRGKQSVALE IKTPEGRADF ERLAAGADAV VNNLRGDQPG KLRITYDDLK
ALNPALVCAH LSAYGRGNSR EAWPGYDYLM QAEAGFMTLT GEPDGPPVRF GLSMVDFMTG
SVFALGIVSA ILGARASGQG CDVDVSLFDV ALHQTSYPAV WAMNEGYQVG RPPRGAHPSI
SPSQRVKTKD GWGMLMCQTQ RFWEVWCDLV GRPELKADPR FLDMPARRAN LDALTPILDA
IMETKTGGDW MAYLGGRVPF APIADLAQAL DNPFVAEVAM RDHVDHPARP QGLDMLACPI
KVDGRRMPAA RAPAMGEHND VLLGRDA