Gene Caul_0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0592 
Symbol 
ID5898047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp653273 
End bp654202 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content64% 
IMG OID641561074 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding 
Protein accessionYP_001682223 
Protein GI167644560 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATCG ATAGGGAACG CCAACCGGTC GCGGTTCTCG GCGCCGGACT GATGGGCGCG 
GGTATTGCTA AAGTCTTCGC GGCGAAGGGC TATCCCGTCT TCTTGTTCGA CCGCGACCTG
GACACCGCCA CCTCCGCCAC GAGGCAAATC AACGGCGCCA TCGCCCATGT CGACGGCGGT
CGCGACGTCG ACGCCGCAGG CAGCTTGGCG GAAGCCGTGG CGGATGCGGC GTTTGTCTTC
GAAAGCGTCT CGGAAAAGCT CGATGTGAAG CGTCGGATTT TCAGCGCGCT CGCCGAATGC
GCCCGACATG ACGCCGTCCT CGCCTCGAAC ACCTCGGCGA TCCCGATTAC CCAGATCGCC
GAAGGCCTGC CCTGTGAGGC GCGCATCGTC GGGTCGCATT GGTGGAATCC CGCGGACGTC
GTCCCCCTGG TGGAGGTCGT TCCCGGTATC GCTACGGACG CCCATCACGT CGAGGCGATG
ATGCAGCTCC TCATCAGCGT CGGCAAAAAG GCCGTGCGCA TCGATCGCGA CATCCCCGGA
TTTGTCGGCA ATCGGCTCCA GTTCGCCCTT TGGCGCGAAG CCCAGAGCCT GGTGGCGAAC
GGCGTCTGCG ATGCGGAGAC GTTGGACGAA ATCGTGAAAT CGAGTTTTGG GCCTCGTCTA
TCGGTGCTCG GGCCGATGGA AAACGCAGAT CTGATCGGCC TGGACCTGAC GCTCGACATC
ATGCGCGTCA TCCTGCCGGA CATTGACAAC AGCCCGGAGC CGGGTCGCCT GCTGACTAGC
CGCGTGGCCG GCCAACACCT CGGATTCAAG ACCGGCGCCG GGTTCCGGGA ATGGACACCC
GCTTCGATCC AGGCGTGCCG TAAGCGCCTT GCATCGCACC TGGACGCGTA CTTTTCAGCG
TCAGGCACCG GGACGGTCGG TCATGACTGA
 
Protein sequence
MTIDRERQPV AVLGAGLMGA GIAKVFAAKG YPVFLFDRDL DTATSATRQI NGAIAHVDGG 
RDVDAAGSLA EAVADAAFVF ESVSEKLDVK RRIFSALAEC ARHDAVLASN TSAIPITQIA
EGLPCEARIV GSHWWNPADV VPLVEVVPGI ATDAHHVEAM MQLLISVGKK AVRIDRDIPG
FVGNRLQFAL WREAQSLVAN GVCDAETLDE IVKSSFGPRL SVLGPMENAD LIGLDLTLDI
MRVILPDIDN SPEPGRLLTS RVAGQHLGFK TGAGFREWTP ASIQACRKRL ASHLDAYFSA
SGTGTVGHD